Protein–RNA interactions for Protein: Q8CG50

Rab43, Ras-related protein Rab-43, mousemouse

Predictions only

Length 210 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab43Q8CG50 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC16.64■□□□□ 0.25
Rab43Q8CG50 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rab43Q8CG50 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rab43Q8CG50 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
Rab43Q8CG50 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rab43Q8CG50 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
Rab43Q8CG50 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rab43Q8CG50 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Rab43Q8CG50 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rab43Q8CG50 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rab43Q8CG50 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
Rab43Q8CG50 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rab43Q8CG50 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rab43Q8CG50 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rab43Q8CG50 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rab43Q8CG50 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rab43Q8CG50 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rab43Q8CG50 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rab43Q8CG50 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rab43Q8CG50 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rab43Q8CG50 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
Rab43Q8CG50 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Rab43Q8CG50 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
Rab43Q8CG50 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rab43Q8CG50 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC16.62■□□□□ 0.25
Rab43Q8CG50 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rab43Q8CG50 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rab43Q8CG50 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rab43Q8CG50 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
Rab43Q8CG50 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rab43Q8CG50 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
Rab43Q8CG50 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Rab43Q8CG50 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rab43Q8CG50 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
Rab43Q8CG50 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rab43Q8CG50 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rab43Q8CG50 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rab43Q8CG50 AC123834.2-201ENSMUST00000224038 2340 ntBASIC16.62■□□□□ 0.25
Rab43Q8CG50 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rab43Q8CG50 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rab43Q8CG50 Gm45606-201ENSMUST00000209836 2795 ntBASIC16.61■□□□□ 0.25
Rab43Q8CG50 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Rab43Q8CG50 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Rab43Q8CG50 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Rab43Q8CG50 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Rab43Q8CG50 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Rab43Q8CG50 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
Rab43Q8CG50 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Rab43Q8CG50 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC16.61■□□□□ 0.25
Rab43Q8CG50 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC16.61■□□□□ 0.25
Rab43Q8CG50 Umpk-ps-201ENSMUST00000211897 827 ntBASIC16.61■□□□□ 0.25
Rab43Q8CG50 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Rab43Q8CG50 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
Rab43Q8CG50 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Rab43Q8CG50 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Rab43Q8CG50 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Rab43Q8CG50 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Rab43Q8CG50 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC16.61■□□□□ 0.25
Rab43Q8CG50 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Rab43Q8CG50 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Rab43Q8CG50 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Rab43Q8CG50 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Rab43Q8CG50 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Rab43Q8CG50 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC16.6■□□□□ 0.25
Rab43Q8CG50 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Rab43Q8CG50 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Rab43Q8CG50 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
Rab43Q8CG50 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Rab43Q8CG50 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Rab43Q8CG50 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Rab43Q8CG50 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
Rab43Q8CG50 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC16.6■□□□□ 0.25
Rab43Q8CG50 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC16.6■□□□□ 0.25
Rab43Q8CG50 Ighv6-1-201ENSMUST00000193612 343 ntBASIC16.6■□□□□ 0.25
Rab43Q8CG50 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Rab43Q8CG50 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC16.6■□□□□ 0.25
Rab43Q8CG50 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
Rab43Q8CG50 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Rab43Q8CG50 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Rab43Q8CG50 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Rab43Q8CG50 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Rab43Q8CG50 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC16.6■□□□□ 0.25
Rab43Q8CG50 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Rab43Q8CG50 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Rab43Q8CG50 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Rab43Q8CG50 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Rab43Q8CG50 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Rab43Q8CG50 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Rab43Q8CG50 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC16.59■□□□□ 0.25
Rab43Q8CG50 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC16.59■□□□□ 0.25
Rab43Q8CG50 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Rab43Q8CG50 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Rab43Q8CG50 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC16.59■□□□□ 0.25
Rab43Q8CG50 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Rab43Q8CG50 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC16.59■□□□□ 0.25
Rab43Q8CG50 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Rab43Q8CG50 Gm44832-201ENSMUST00000208849 2303 ntBASIC16.59■□□□□ 0.25
Rab43Q8CG50 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Rab43Q8CG50 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Rab43Q8CG50 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 30.4 ms