Protein–RNA interactions for Protein: Q8CDR2

Rsph6a, Radial spoke head protein 6 homolog A, mousemouse

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rsph6aQ8CDR2 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
Rsph6aQ8CDR2 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC22.22■■□□□ 1.15
Rsph6aQ8CDR2 Otx2os1-206ENSMUST00000228153 787 ntBASIC22.22■■□□□ 1.15
Rsph6aQ8CDR2 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC22.22■■□□□ 1.15
Rsph6aQ8CDR2 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Rsph6aQ8CDR2 Gm6190-201ENSMUST00000220683 1374 ntBASIC22.22■■□□□ 1.15
Rsph6aQ8CDR2 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Rsph6aQ8CDR2 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Rsph6aQ8CDR2 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC22.21■■□□□ 1.15
Rsph6aQ8CDR2 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Rsph6aQ8CDR2 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Rsph6aQ8CDR2 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC22.21■■□□□ 1.15
Rsph6aQ8CDR2 Gm43808-201ENSMUST00000202534 2065 ntBASIC22.21■■□□□ 1.15
Rsph6aQ8CDR2 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC22.21■■□□□ 1.15
Rsph6aQ8CDR2 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC22.21■■□□□ 1.15
Rsph6aQ8CDR2 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Rsph6aQ8CDR2 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC22.21■■□□□ 1.15
Rsph6aQ8CDR2 Gm27357-201ENSMUST00000183754 135 ntBASIC22.21■■□□□ 1.15
Rsph6aQ8CDR2 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
Rsph6aQ8CDR2 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC22.21■■□□□ 1.15
Rsph6aQ8CDR2 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Rsph6aQ8CDR2 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC22.21■■□□□ 1.15
Rsph6aQ8CDR2 Gm43182-201ENSMUST00000199476 2528 ntBASIC22.21■■□□□ 1.15
Rsph6aQ8CDR2 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Rsph6aQ8CDR2 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC22.21■■□□□ 1.15
Rsph6aQ8CDR2 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Rsph6aQ8CDR2 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC22.21■■□□□ 1.15
Rsph6aQ8CDR2 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
Rsph6aQ8CDR2 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
Rsph6aQ8CDR2 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Rsph6aQ8CDR2 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC22.2■■□□□ 1.15
Rsph6aQ8CDR2 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.15
Rsph6aQ8CDR2 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Rsph6aQ8CDR2 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Rsph6aQ8CDR2 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC22.2■■□□□ 1.14
Rsph6aQ8CDR2 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC22.2■■□□□ 1.14
Rsph6aQ8CDR2 Olfr129-201ENSMUST00000122318 993 ntBASIC22.2■■□□□ 1.14
Rsph6aQ8CDR2 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Rsph6aQ8CDR2 Gm45328-201ENSMUST00000210942 917 ntBASIC22.2■■□□□ 1.14
Rsph6aQ8CDR2 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC22.2■■□□□ 1.14
Rsph6aQ8CDR2 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Rsph6aQ8CDR2 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC22.2■■□□□ 1.14
Rsph6aQ8CDR2 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC22.2■■□□□ 1.14
Rsph6aQ8CDR2 Zkscan4-202ENSMUST00000225845 1506 ntBASIC22.2■■□□□ 1.14
Rsph6aQ8CDR2 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
Rsph6aQ8CDR2 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Rsph6aQ8CDR2 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC22.2■■□□□ 1.14
Rsph6aQ8CDR2 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Rsph6aQ8CDR2 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC22.19■■□□□ 1.14
Rsph6aQ8CDR2 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC22.19■■□□□ 1.14
Rsph6aQ8CDR2 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
Rsph6aQ8CDR2 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
Rsph6aQ8CDR2 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC22.19■■□□□ 1.14
Rsph6aQ8CDR2 Gm27741-201ENSMUST00000185060 237 ntBASIC22.19■■□□□ 1.14
Rsph6aQ8CDR2 Gm17971-201ENSMUST00000190239 806 ntBASIC22.19■■□□□ 1.14
Rsph6aQ8CDR2 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC22.19■■□□□ 1.14
Rsph6aQ8CDR2 Gm44450-201ENSMUST00000199528 114 ntBASIC22.19■■□□□ 1.14
Rsph6aQ8CDR2 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
Rsph6aQ8CDR2 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC22.19■■□□□ 1.14
Rsph6aQ8CDR2 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC22.19■■□□□ 1.14
Rsph6aQ8CDR2 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Rsph6aQ8CDR2 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Rsph6aQ8CDR2 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
Rsph6aQ8CDR2 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Rsph6aQ8CDR2 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC22.19■■□□□ 1.14
Rsph6aQ8CDR2 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC22.19■■□□□ 1.14
Rsph6aQ8CDR2 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC22.19■■□□□ 1.14
Rsph6aQ8CDR2 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Rsph6aQ8CDR2 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Rsph6aQ8CDR2 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Rsph6aQ8CDR2 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC22.18■■□□□ 1.14
Rsph6aQ8CDR2 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Rsph6aQ8CDR2 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Rsph6aQ8CDR2 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
Rsph6aQ8CDR2 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Rsph6aQ8CDR2 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC22.18■■□□□ 1.14
Rsph6aQ8CDR2 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC22.18■■□□□ 1.14
Rsph6aQ8CDR2 Gm15794-201ENSMUST00000120182 631 ntBASIC22.18■■□□□ 1.14
Rsph6aQ8CDR2 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC22.18■■□□□ 1.14
Rsph6aQ8CDR2 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
Rsph6aQ8CDR2 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC22.18■■□□□ 1.14
Rsph6aQ8CDR2 Gm18669-201ENSMUST00000216049 778 ntBASIC22.18■■□□□ 1.14
Rsph6aQ8CDR2 Gm18115-201ENSMUST00000221209 621 ntBASIC22.18■■□□□ 1.14
Rsph6aQ8CDR2 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC22.18■■□□□ 1.14
Rsph6aQ8CDR2 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC22.18■■□□□ 1.14
Rsph6aQ8CDR2 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Rsph6aQ8CDR2 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC22.18■■□□□ 1.14
Rsph6aQ8CDR2 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC22.18■■□□□ 1.14
Rsph6aQ8CDR2 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
Rsph6aQ8CDR2 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Rsph6aQ8CDR2 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC22.17■■□□□ 1.14
Rsph6aQ8CDR2 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
Rsph6aQ8CDR2 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Rsph6aQ8CDR2 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
Rsph6aQ8CDR2 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC22.17■■□□□ 1.14
Rsph6aQ8CDR2 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC22.17■■□□□ 1.14
Rsph6aQ8CDR2 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC22.17■■□□□ 1.14
Rsph6aQ8CDR2 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
Rsph6aQ8CDR2 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Rsph6aQ8CDR2 AC159205.3-201ENSMUST00000224614 874 ntBASIC22.17■■□□□ 1.14
Retrieved 100 of 76,532 protein–RNA pairs in 29.8 ms