Protein–RNA interactions for Protein: Q8CCJ3

Ufl1, E3 UFM1-protein ligase 1, mousemouse

Known RBP Predictions only

Length 793 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ufl1Q8CCJ3 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Ufl1Q8CCJ3 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Ufl1Q8CCJ3 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Ufl1Q8CCJ3 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC20.45■□□□□ 0.86
Ufl1Q8CCJ3 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Ufl1Q8CCJ3 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Ufl1Q8CCJ3 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Ufl1Q8CCJ3 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Ufl1Q8CCJ3 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
Ufl1Q8CCJ3 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
Ufl1Q8CCJ3 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Ufl1Q8CCJ3 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Ufl1Q8CCJ3 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Ufl1Q8CCJ3 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Ufl1Q8CCJ3 AC122351.1-201ENSMUST00000220467 126 ntBASIC20.45■□□□□ 0.86
Ufl1Q8CCJ3 AC130713.1-201ENSMUST00000228853 1096 ntBASIC20.45■□□□□ 0.86
Ufl1Q8CCJ3 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Ufl1Q8CCJ3 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
Ufl1Q8CCJ3 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Ufl1Q8CCJ3 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
Ufl1Q8CCJ3 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
Ufl1Q8CCJ3 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Ufl1Q8CCJ3 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
Ufl1Q8CCJ3 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Ufl1Q8CCJ3 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Ufl1Q8CCJ3 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Ufl1Q8CCJ3 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Ufl1Q8CCJ3 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Ufl1Q8CCJ3 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Ufl1Q8CCJ3 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
Ufl1Q8CCJ3 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Ufl1Q8CCJ3 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Ufl1Q8CCJ3 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
Ufl1Q8CCJ3 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Ufl1Q8CCJ3 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Ufl1Q8CCJ3 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Ufl1Q8CCJ3 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC20.44■□□□□ 0.86
Ufl1Q8CCJ3 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Ufl1Q8CCJ3 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Ufl1Q8CCJ3 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Ufl1Q8CCJ3 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
Ufl1Q8CCJ3 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Ufl1Q8CCJ3 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Ufl1Q8CCJ3 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Ufl1Q8CCJ3 Cxcl14-202ENSMUST00000224801 1467 ntBASIC20.43■□□□□ 0.86
Ufl1Q8CCJ3 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Ufl1Q8CCJ3 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Ufl1Q8CCJ3 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Ufl1Q8CCJ3 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
Ufl1Q8CCJ3 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Ufl1Q8CCJ3 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
Ufl1Q8CCJ3 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Ufl1Q8CCJ3 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Ufl1Q8CCJ3 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Ufl1Q8CCJ3 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Ufl1Q8CCJ3 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Ufl1Q8CCJ3 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Ufl1Q8CCJ3 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Ufl1Q8CCJ3 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Ufl1Q8CCJ3 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC20.42■□□□□ 0.86
Ufl1Q8CCJ3 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Ufl1Q8CCJ3 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC20.42■□□□□ 0.86
Ufl1Q8CCJ3 Wnt10b-204ENSMUST00000226655 1807 ntBASIC20.42■□□□□ 0.86
Ufl1Q8CCJ3 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Ufl1Q8CCJ3 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
Ufl1Q8CCJ3 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Ufl1Q8CCJ3 Gm13186-201ENSMUST00000118031 316 ntBASIC20.42■□□□□ 0.86
Ufl1Q8CCJ3 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Ufl1Q8CCJ3 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC20.42■□□□□ 0.86
Ufl1Q8CCJ3 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
Ufl1Q8CCJ3 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC20.42■□□□□ 0.86
Ufl1Q8CCJ3 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Ufl1Q8CCJ3 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Ufl1Q8CCJ3 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC20.42■□□□□ 0.86
Ufl1Q8CCJ3 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC20.42■□□□□ 0.86
Ufl1Q8CCJ3 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Ufl1Q8CCJ3 Phf7-203ENSMUST00000226565 1971 ntBASIC20.41■□□□□ 0.86
Ufl1Q8CCJ3 Fcho2-208ENSMUST00000224992 2964 ntBASIC20.41■□□□□ 0.86
Ufl1Q8CCJ3 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Ufl1Q8CCJ3 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Ufl1Q8CCJ3 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC20.41■□□□□ 0.86
Ufl1Q8CCJ3 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC20.41■□□□□ 0.86
Ufl1Q8CCJ3 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC20.41■□□□□ 0.86
Ufl1Q8CCJ3 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC20.41■□□□□ 0.86
Ufl1Q8CCJ3 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Ufl1Q8CCJ3 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
Ufl1Q8CCJ3 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
Ufl1Q8CCJ3 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Ufl1Q8CCJ3 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
Ufl1Q8CCJ3 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Ufl1Q8CCJ3 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC20.41■□□□□ 0.86
Ufl1Q8CCJ3 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Ufl1Q8CCJ3 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Ufl1Q8CCJ3 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
Ufl1Q8CCJ3 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Ufl1Q8CCJ3 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC20.41■□□□□ 0.86
Ufl1Q8CCJ3 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
Ufl1Q8CCJ3 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Ufl1Q8CCJ3 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Ufl1Q8CCJ3 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Retrieved 100 of 76,532 protein–RNA pairs in 9.2 ms