Protein–RNA interactions for Protein: Q8CCH2

Nhlrc3, NHL repeat-containing protein 3, mousemouse

Predictions only

Length 347 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nhlrc3Q8CCH2 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Nhlrc3Q8CCH2 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC14.38□□□□□ -0.11
Nhlrc3Q8CCH2 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Nhlrc3Q8CCH2 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Nhlrc3Q8CCH2 Gm45560-201ENSMUST00000211492 1472 ntBASIC14.38□□□□□ -0.11
Nhlrc3Q8CCH2 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Nhlrc3Q8CCH2 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Nhlrc3Q8CCH2 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Nhlrc3Q8CCH2 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Nhlrc3Q8CCH2 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Nhlrc3Q8CCH2 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Nhlrc3Q8CCH2 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Nhlrc3Q8CCH2 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Nhlrc3Q8CCH2 Gm12933-201ENSMUST00000120203 872 ntBASIC14.38□□□□□ -0.11
Nhlrc3Q8CCH2 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Nhlrc3Q8CCH2 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Nhlrc3Q8CCH2 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC14.38□□□□□ -0.11
Nhlrc3Q8CCH2 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Nhlrc3Q8CCH2 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC14.38□□□□□ -0.11
Nhlrc3Q8CCH2 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Nhlrc3Q8CCH2 Gm43859-201ENSMUST00000200075 1412 ntBASIC14.38□□□□□ -0.11
Nhlrc3Q8CCH2 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Nhlrc3Q8CCH2 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Nhlrc3Q8CCH2 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Nhlrc3Q8CCH2 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Nhlrc3Q8CCH2 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Nhlrc3Q8CCH2 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Nhlrc3Q8CCH2 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Nhlrc3Q8CCH2 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Nhlrc3Q8CCH2 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Nhlrc3Q8CCH2 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
Nhlrc3Q8CCH2 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Nhlrc3Q8CCH2 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Nhlrc3Q8CCH2 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Nhlrc3Q8CCH2 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Nhlrc3Q8CCH2 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Nhlrc3Q8CCH2 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Nhlrc3Q8CCH2 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Nhlrc3Q8CCH2 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
Nhlrc3Q8CCH2 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Nhlrc3Q8CCH2 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Nhlrc3Q8CCH2 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Nhlrc3Q8CCH2 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC14.37□□□□□ -0.11
Nhlrc3Q8CCH2 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Nhlrc3Q8CCH2 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Nhlrc3Q8CCH2 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Nhlrc3Q8CCH2 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Nhlrc3Q8CCH2 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Nhlrc3Q8CCH2 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Nhlrc3Q8CCH2 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC14.37□□□□□ -0.11
Nhlrc3Q8CCH2 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Nhlrc3Q8CCH2 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Nhlrc3Q8CCH2 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Nhlrc3Q8CCH2 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Nhlrc3Q8CCH2 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Nhlrc3Q8CCH2 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Nhlrc3Q8CCH2 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Nhlrc3Q8CCH2 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Nhlrc3Q8CCH2 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Nhlrc3Q8CCH2 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Nhlrc3Q8CCH2 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Nhlrc3Q8CCH2 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC14.36□□□□□ -0.11
Nhlrc3Q8CCH2 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Nhlrc3Q8CCH2 Alkbh1-212ENSMUST00000185301 408 ntBASIC14.36□□□□□ -0.11
Nhlrc3Q8CCH2 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Nhlrc3Q8CCH2 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
Nhlrc3Q8CCH2 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Nhlrc3Q8CCH2 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Nhlrc3Q8CCH2 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Nhlrc3Q8CCH2 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Nhlrc3Q8CCH2 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Nhlrc3Q8CCH2 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Nhlrc3Q8CCH2 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Nhlrc3Q8CCH2 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC14.35□□□□□ -0.11
Nhlrc3Q8CCH2 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Nhlrc3Q8CCH2 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Nhlrc3Q8CCH2 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Nhlrc3Q8CCH2 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Nhlrc3Q8CCH2 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Nhlrc3Q8CCH2 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Nhlrc3Q8CCH2 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Nhlrc3Q8CCH2 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC14.35□□□□□ -0.11
Nhlrc3Q8CCH2 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC14.35□□□□□ -0.11
Nhlrc3Q8CCH2 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Nhlrc3Q8CCH2 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Nhlrc3Q8CCH2 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC14.35□□□□□ -0.11
Nhlrc3Q8CCH2 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Nhlrc3Q8CCH2 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Nhlrc3Q8CCH2 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
Nhlrc3Q8CCH2 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Nhlrc3Q8CCH2 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Nhlrc3Q8CCH2 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Nhlrc3Q8CCH2 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC14.35□□□□□ -0.11
Nhlrc3Q8CCH2 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Nhlrc3Q8CCH2 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Nhlrc3Q8CCH2 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Nhlrc3Q8CCH2 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Nhlrc3Q8CCH2 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Nhlrc3Q8CCH2 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Nhlrc3Q8CCH2 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 28.9 ms