Protein–RNA interactions for Protein: Q8CA71

Shisa4, Protein shisa-4, mousemouse

Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa4Q8CA71 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC19.84■□□□□ 0.77
Shisa4Q8CA71 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC19.84■□□□□ 0.77
Shisa4Q8CA71 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Shisa4Q8CA71 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.77
Shisa4Q8CA71 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC19.83■□□□□ 0.77
Shisa4Q8CA71 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Shisa4Q8CA71 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC19.83■□□□□ 0.77
Shisa4Q8CA71 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Shisa4Q8CA71 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC19.83■□□□□ 0.77
Shisa4Q8CA71 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.77
Shisa4Q8CA71 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC19.83■□□□□ 0.77
Shisa4Q8CA71 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC19.83■□□□□ 0.77
Shisa4Q8CA71 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Shisa4Q8CA71 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Shisa4Q8CA71 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Shisa4Q8CA71 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Shisa4Q8CA71 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC19.83■□□□□ 0.77
Shisa4Q8CA71 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
Shisa4Q8CA71 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
Shisa4Q8CA71 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
Shisa4Q8CA71 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.76
Shisa4Q8CA71 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Shisa4Q8CA71 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC19.82■□□□□ 0.76
Shisa4Q8CA71 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
Shisa4Q8CA71 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Shisa4Q8CA71 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC19.82■□□□□ 0.76
Shisa4Q8CA71 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Shisa4Q8CA71 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC19.82■□□□□ 0.76
Shisa4Q8CA71 Gm13186-201ENSMUST00000118031 316 ntBASIC19.82■□□□□ 0.76
Shisa4Q8CA71 Gm23634-201ENSMUST00000175071 91 ntBASIC19.82■□□□□ 0.76
Shisa4Q8CA71 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC19.82■□□□□ 0.76
Shisa4Q8CA71 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Shisa4Q8CA71 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
Shisa4Q8CA71 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Shisa4Q8CA71 Phf7-203ENSMUST00000226565 1971 ntBASIC19.82■□□□□ 0.76
Shisa4Q8CA71 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC19.82■□□□□ 0.76
Shisa4Q8CA71 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC19.82■□□□□ 0.76
Shisa4Q8CA71 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Shisa4Q8CA71 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
Shisa4Q8CA71 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Shisa4Q8CA71 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Shisa4Q8CA71 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Shisa4Q8CA71 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Shisa4Q8CA71 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Shisa4Q8CA71 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
Shisa4Q8CA71 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Shisa4Q8CA71 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC19.81■□□□□ 0.76
Shisa4Q8CA71 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
Shisa4Q8CA71 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Shisa4Q8CA71 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
Shisa4Q8CA71 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Shisa4Q8CA71 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Shisa4Q8CA71 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
Shisa4Q8CA71 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Shisa4Q8CA71 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Shisa4Q8CA71 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
Shisa4Q8CA71 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
Shisa4Q8CA71 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Shisa4Q8CA71 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Shisa4Q8CA71 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Shisa4Q8CA71 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Shisa4Q8CA71 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Shisa4Q8CA71 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
Shisa4Q8CA71 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC19.8■□□□□ 0.76
Shisa4Q8CA71 Gm22697-201ENSMUST00000175194 63 ntBASIC19.8■□□□□ 0.76
Shisa4Q8CA71 Gm21559-201ENSMUST00000220638 855 ntBASIC19.8■□□□□ 0.76
Shisa4Q8CA71 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Shisa4Q8CA71 Gm8587-201ENSMUST00000076538 843 ntBASIC19.8■□□□□ 0.76
Shisa4Q8CA71 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Shisa4Q8CA71 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Shisa4Q8CA71 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Shisa4Q8CA71 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
Shisa4Q8CA71 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Shisa4Q8CA71 Gm7292-201ENSMUST00000194706 2527 ntBASIC19.79■□□□□ 0.76
Shisa4Q8CA71 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Shisa4Q8CA71 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Shisa4Q8CA71 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Shisa4Q8CA71 Gm14464-201ENSMUST00000119658 1254 ntBASIC19.79■□□□□ 0.76
Shisa4Q8CA71 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Shisa4Q8CA71 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC19.79■□□□□ 0.76
Shisa4Q8CA71 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Shisa4Q8CA71 Gm6345-202ENSMUST00000180900 204 ntBASIC19.79■□□□□ 0.76
Shisa4Q8CA71 Gm33142-201ENSMUST00000193913 867 ntBASIC19.79■□□□□ 0.76
Shisa4Q8CA71 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Shisa4Q8CA71 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Shisa4Q8CA71 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Shisa4Q8CA71 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
Shisa4Q8CA71 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Shisa4Q8CA71 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC19.79■□□□□ 0.76
Shisa4Q8CA71 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
Shisa4Q8CA71 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
Shisa4Q8CA71 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Shisa4Q8CA71 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC19.79■□□□□ 0.76
Shisa4Q8CA71 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Shisa4Q8CA71 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC19.78■□□□□ 0.76
Shisa4Q8CA71 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Shisa4Q8CA71 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Shisa4Q8CA71 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
Shisa4Q8CA71 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Shisa4Q8CA71 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC19.78■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 34.6 ms