Protein–RNA interactions for Protein: Q8C6K9

Col6a6, Collagen alpha-6(VI) chain, mousemouse

Predictions only

Length 2,265 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a6Q8C6K9 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC15.35■□□□□ 0.05
Col6a6Q8C6K9 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Col6a6Q8C6K9 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Col6a6Q8C6K9 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Col6a6Q8C6K9 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Col6a6Q8C6K9 Zkscan4-202ENSMUST00000225845 1506 ntBASIC15.35■□□□□ 0.05
Col6a6Q8C6K9 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Col6a6Q8C6K9 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Col6a6Q8C6K9 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Col6a6Q8C6K9 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
Col6a6Q8C6K9 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Col6a6Q8C6K9 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Col6a6Q8C6K9 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Col6a6Q8C6K9 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC15.34■□□□□ 0.05
Col6a6Q8C6K9 Gm15492-201ENSMUST00000156734 606 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Col6a6Q8C6K9 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC15.34■□□□□ 0.05
Col6a6Q8C6K9 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
Col6a6Q8C6K9 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC15.34■□□□□ 0.05
Col6a6Q8C6K9 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Col6a6Q8C6K9 Prss22-201ENSMUST00000041649 1323 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Col6a6Q8C6K9 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Col6a6Q8C6K9 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Col6a6Q8C6K9 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
Col6a6Q8C6K9 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Col6a6Q8C6K9 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Col6a6Q8C6K9 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Col6a6Q8C6K9 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Col6a6Q8C6K9 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
Col6a6Q8C6K9 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Col6a6Q8C6K9 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Col6a6Q8C6K9 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Col6a6Q8C6K9 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Col6a6Q8C6K9 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Col6a6Q8C6K9 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Col6a6Q8C6K9 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Col6a6Q8C6K9 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Col6a6Q8C6K9 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Col6a6Q8C6K9 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Col6a6Q8C6K9 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Col6a6Q8C6K9 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.05
Col6a6Q8C6K9 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
Col6a6Q8C6K9 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Col6a6Q8C6K9 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC15.33■□□□□ 0.05
Col6a6Q8C6K9 Gm13884-201ENSMUST00000118103 829 ntBASIC15.33■□□□□ 0.05
Col6a6Q8C6K9 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
Col6a6Q8C6K9 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Col6a6Q8C6K9 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Col6a6Q8C6K9 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC15.33■□□□□ 0.04
Col6a6Q8C6K9 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC15.33■□□□□ 0.04
Col6a6Q8C6K9 Iqck-206ENSMUST00000208658 2891 ntBASIC15.33■□□□□ 0.04
Col6a6Q8C6K9 AC159093.1-201ENSMUST00000227779 380 ntBASIC15.33■□□□□ 0.04
Col6a6Q8C6K9 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Col6a6Q8C6K9 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC15.32■□□□□ 0.04
Col6a6Q8C6K9 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Col6a6Q8C6K9 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Col6a6Q8C6K9 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Col6a6Q8C6K9 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC15.32■□□□□ 0.04
Col6a6Q8C6K9 Gm27867-201ENSMUST00000184778 125 ntBASIC15.32■□□□□ 0.04
Col6a6Q8C6K9 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC15.32■□□□□ 0.04
Col6a6Q8C6K9 Stard3nl-209ENSMUST00000221380 1268 ntTSL 5 BASIC15.32■□□□□ 0.04
Col6a6Q8C6K9 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Col6a6Q8C6K9 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Col6a6Q8C6K9 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Col6a6Q8C6K9 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Col6a6Q8C6K9 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Col6a6Q8C6K9 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Col6a6Q8C6K9 Pla2g10-201ENSMUST00000023364 1423 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Col6a6Q8C6K9 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC15.32■□□□□ 0.04
Col6a6Q8C6K9 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC15.32■□□□□ 0.04
Col6a6Q8C6K9 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Col6a6Q8C6K9 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Col6a6Q8C6K9 Gm7935-201ENSMUST00000100555 1278 ntBASIC15.32■□□□□ 0.04
Col6a6Q8C6K9 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Col6a6Q8C6K9 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC15.32■□□□□ 0.04
Col6a6Q8C6K9 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC15.32■□□□□ 0.04
Col6a6Q8C6K9 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Col6a6Q8C6K9 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Col6a6Q8C6K9 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Col6a6Q8C6K9 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC15.32■□□□□ 0.04
Col6a6Q8C6K9 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Col6a6Q8C6K9 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Col6a6Q8C6K9 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Col6a6Q8C6K9 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Col6a6Q8C6K9 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Col6a6Q8C6K9 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Col6a6Q8C6K9 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Col6a6Q8C6K9 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Col6a6Q8C6K9 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Col6a6Q8C6K9 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Col6a6Q8C6K9 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC15.31■□□□□ 0.04
Col6a6Q8C6K9 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Col6a6Q8C6K9 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC15.31■□□□□ 0.04
Col6a6Q8C6K9 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Col6a6Q8C6K9 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Col6a6Q8C6K9 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Col6a6Q8C6K9 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
Col6a6Q8C6K9 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Col6a6Q8C6K9 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Col6a6Q8C6K9 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Col6a6Q8C6K9 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC15.31■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 27.5 ms