Protein–RNA interactions for Protein: Q8C2S0

Usp44, Ubiquitin carboxyl-terminal hydrolase 44, mousemouse

Predictions only

Length 711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp44Q8C2S0 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
Usp44Q8C2S0 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
Usp44Q8C2S0 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Usp44Q8C2S0 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
Usp44Q8C2S0 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
Usp44Q8C2S0 Gm16061-201ENSMUST00000122167 857 ntBASIC19.95■□□□□ 0.78
Usp44Q8C2S0 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
Usp44Q8C2S0 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
Usp44Q8C2S0 Krtap5-1-202ENSMUST00000188274 742 ntBASIC19.95■□□□□ 0.78
Usp44Q8C2S0 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Usp44Q8C2S0 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC19.95■□□□□ 0.78
Usp44Q8C2S0 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC19.95■□□□□ 0.78
Usp44Q8C2S0 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Usp44Q8C2S0 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Usp44Q8C2S0 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Usp44Q8C2S0 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Usp44Q8C2S0 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
Usp44Q8C2S0 Gm6433-201ENSMUST00000118634 875 ntBASIC19.94■□□□□ 0.78
Usp44Q8C2S0 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Usp44Q8C2S0 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC19.94■□□□□ 0.78
Usp44Q8C2S0 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC19.94■□□□□ 0.78
Usp44Q8C2S0 AC153881.2-201ENSMUST00000214877 204 ntBASIC19.94■□□□□ 0.78
Usp44Q8C2S0 AC159205.6-201ENSMUST00000224935 887 ntBASIC19.94■□□□□ 0.78
Usp44Q8C2S0 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
Usp44Q8C2S0 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
Usp44Q8C2S0 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
Usp44Q8C2S0 Spsb2-203ENSMUST00000112473 1322 ntBASIC19.94■□□□□ 0.78
Usp44Q8C2S0 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Usp44Q8C2S0 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
Usp44Q8C2S0 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Usp44Q8C2S0 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
Usp44Q8C2S0 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Usp44Q8C2S0 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Usp44Q8C2S0 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Usp44Q8C2S0 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
Usp44Q8C2S0 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Usp44Q8C2S0 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
Usp44Q8C2S0 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Usp44Q8C2S0 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Usp44Q8C2S0 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
Usp44Q8C2S0 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Usp44Q8C2S0 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
Usp44Q8C2S0 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Usp44Q8C2S0 AC107711.5-202ENSMUST00000226429 702 ntBASIC19.93■□□□□ 0.78
Usp44Q8C2S0 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Usp44Q8C2S0 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC19.93■□□□□ 0.78
Usp44Q8C2S0 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC19.93■□□□□ 0.78
Usp44Q8C2S0 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Usp44Q8C2S0 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Usp44Q8C2S0 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Usp44Q8C2S0 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Usp44Q8C2S0 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
Usp44Q8C2S0 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
Usp44Q8C2S0 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
Usp44Q8C2S0 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Usp44Q8C2S0 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
Usp44Q8C2S0 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
Usp44Q8C2S0 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Usp44Q8C2S0 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Usp44Q8C2S0 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC19.92■□□□□ 0.78
Usp44Q8C2S0 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Usp44Q8C2S0 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Usp44Q8C2S0 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Usp44Q8C2S0 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Usp44Q8C2S0 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Usp44Q8C2S0 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC19.92■□□□□ 0.78
Usp44Q8C2S0 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
Usp44Q8C2S0 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Usp44Q8C2S0 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Usp44Q8C2S0 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Usp44Q8C2S0 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Usp44Q8C2S0 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Usp44Q8C2S0 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Usp44Q8C2S0 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC19.92■□□□□ 0.78
Usp44Q8C2S0 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Usp44Q8C2S0 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Usp44Q8C2S0 Gm7292-201ENSMUST00000194706 2527 ntBASIC19.92■□□□□ 0.78
Usp44Q8C2S0 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
Usp44Q8C2S0 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Usp44Q8C2S0 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Usp44Q8C2S0 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Usp44Q8C2S0 Gm45058-201ENSMUST00000205810 766 ntBASIC19.91■□□□□ 0.78
Usp44Q8C2S0 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC19.91■□□□□ 0.78
Usp44Q8C2S0 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Usp44Q8C2S0 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Usp44Q8C2S0 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC19.91■□□□□ 0.78
Usp44Q8C2S0 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
Usp44Q8C2S0 Actl10-202ENSMUST00000226583 1501 ntBASIC19.91■□□□□ 0.78
Usp44Q8C2S0 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
Usp44Q8C2S0 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Usp44Q8C2S0 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Usp44Q8C2S0 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Usp44Q8C2S0 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Usp44Q8C2S0 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Usp44Q8C2S0 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
Usp44Q8C2S0 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Usp44Q8C2S0 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Usp44Q8C2S0 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC19.9■□□□□ 0.78
Usp44Q8C2S0 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Usp44Q8C2S0 Gm13474-201ENSMUST00000122466 815 ntBASIC19.9■□□□□ 0.78
Retrieved 100 of 76,532 protein–RNA pairs in 19.6 ms