Protein–RNA interactions for Protein: Q8C2E4

Ptcd1, Pentatricopeptide repeat-containing protein 1, mitochondrial, mousemouse

Known RBP Predictions only

Length 695 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptcd1Q8C2E4 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
Ptcd1Q8C2E4 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Ptcd1Q8C2E4 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC20.97■□□□□ 0.95
Ptcd1Q8C2E4 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Ptcd1Q8C2E4 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Ptcd1Q8C2E4 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC20.97■□□□□ 0.95
Ptcd1Q8C2E4 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Ptcd1Q8C2E4 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Ptcd1Q8C2E4 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC20.96■□□□□ 0.95
Ptcd1Q8C2E4 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC20.96■□□□□ 0.95
Ptcd1Q8C2E4 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
Ptcd1Q8C2E4 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC20.96■□□□□ 0.95
Ptcd1Q8C2E4 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Ptcd1Q8C2E4 Gm18733-201ENSMUST00000173950 856 ntBASIC20.96■□□□□ 0.95
Ptcd1Q8C2E4 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
Ptcd1Q8C2E4 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC20.96■□□□□ 0.95
Ptcd1Q8C2E4 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC20.96■□□□□ 0.95
Ptcd1Q8C2E4 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Ptcd1Q8C2E4 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Ptcd1Q8C2E4 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Ptcd1Q8C2E4 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Ptcd1Q8C2E4 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.95
Ptcd1Q8C2E4 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Ptcd1Q8C2E4 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
Ptcd1Q8C2E4 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Ptcd1Q8C2E4 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Ptcd1Q8C2E4 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Ptcd1Q8C2E4 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC20.95■□□□□ 0.94
Ptcd1Q8C2E4 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Ptcd1Q8C2E4 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC20.95■□□□□ 0.94
Ptcd1Q8C2E4 Gm11452-201ENSMUST00000122376 690 ntBASIC20.95■□□□□ 0.94
Ptcd1Q8C2E4 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC20.95■□□□□ 0.94
Ptcd1Q8C2E4 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC20.95■□□□□ 0.94
Ptcd1Q8C2E4 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Ptcd1Q8C2E4 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Ptcd1Q8C2E4 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Ptcd1Q8C2E4 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Ptcd1Q8C2E4 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Ptcd1Q8C2E4 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Ptcd1Q8C2E4 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Ptcd1Q8C2E4 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC20.95■□□□□ 0.94
Ptcd1Q8C2E4 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Ptcd1Q8C2E4 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Ptcd1Q8C2E4 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Ptcd1Q8C2E4 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Ptcd1Q8C2E4 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Ptcd1Q8C2E4 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC20.94■□□□□ 0.94
Ptcd1Q8C2E4 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC20.94■□□□□ 0.94
Ptcd1Q8C2E4 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Ptcd1Q8C2E4 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
Ptcd1Q8C2E4 AC124569.2-201ENSMUST00000225998 818 ntBASIC20.94■□□□□ 0.94
Ptcd1Q8C2E4 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Ptcd1Q8C2E4 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Ptcd1Q8C2E4 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Ptcd1Q8C2E4 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Ptcd1Q8C2E4 Cxcl14-202ENSMUST00000224801 1467 ntBASIC20.94■□□□□ 0.94
Ptcd1Q8C2E4 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
Ptcd1Q8C2E4 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Ptcd1Q8C2E4 Gm44832-201ENSMUST00000208849 2303 ntBASIC20.93■□□□□ 0.94
Ptcd1Q8C2E4 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Ptcd1Q8C2E4 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Ptcd1Q8C2E4 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
Ptcd1Q8C2E4 Gm15794-201ENSMUST00000120182 631 ntBASIC20.93■□□□□ 0.94
Ptcd1Q8C2E4 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Ptcd1Q8C2E4 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Ptcd1Q8C2E4 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Ptcd1Q8C2E4 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Ptcd1Q8C2E4 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC20.93■□□□□ 0.94
Ptcd1Q8C2E4 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Ptcd1Q8C2E4 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
Ptcd1Q8C2E4 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Ptcd1Q8C2E4 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Ptcd1Q8C2E4 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC20.93■□□□□ 0.94
Ptcd1Q8C2E4 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Ptcd1Q8C2E4 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
Ptcd1Q8C2E4 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
Ptcd1Q8C2E4 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
Ptcd1Q8C2E4 Gm12895-201ENSMUST00000122214 226 ntBASIC20.92■□□□□ 0.94
Ptcd1Q8C2E4 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Ptcd1Q8C2E4 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Ptcd1Q8C2E4 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Ptcd1Q8C2E4 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Ptcd1Q8C2E4 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Ptcd1Q8C2E4 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Ptcd1Q8C2E4 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Ptcd1Q8C2E4 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Ptcd1Q8C2E4 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Ptcd1Q8C2E4 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Ptcd1Q8C2E4 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Ptcd1Q8C2E4 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC20.91■□□□□ 0.94
Ptcd1Q8C2E4 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC20.91■□□□□ 0.94
Ptcd1Q8C2E4 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC20.91■□□□□ 0.94
Ptcd1Q8C2E4 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Ptcd1Q8C2E4 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Ptcd1Q8C2E4 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Ptcd1Q8C2E4 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Ptcd1Q8C2E4 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Ptcd1Q8C2E4 Zcchc6-207ENSMUST00000225576 2499 ntBASIC20.91■□□□□ 0.94
Ptcd1Q8C2E4 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
Ptcd1Q8C2E4 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Retrieved 100 of 76,532 protein–RNA pairs in 19.5 ms