Protein–RNA interactions for Protein: Q8C120

Sh3rf3, SH3 domain-containing RING finger protein 3, mousemouse

Predictions only

Length 878 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf3Q8C120 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC17.76■□□□□ 0.43
Sh3rf3Q8C120 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC17.76■□□□□ 0.43
Sh3rf3Q8C120 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Sh3rf3Q8C120 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC17.76■□□□□ 0.43
Sh3rf3Q8C120 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC17.76■□□□□ 0.43
Sh3rf3Q8C120 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC17.76■□□□□ 0.43
Sh3rf3Q8C120 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Sh3rf3Q8C120 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Sh3rf3Q8C120 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Sh3rf3Q8C120 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Sh3rf3Q8C120 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
Sh3rf3Q8C120 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Sh3rf3Q8C120 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
Sh3rf3Q8C120 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Sh3rf3Q8C120 Gm28265-201ENSMUST00000188201 2319 ntBASIC17.76■□□□□ 0.43
Sh3rf3Q8C120 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Sh3rf3Q8C120 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC17.76■□□□□ 0.43
Sh3rf3Q8C120 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC17.75■□□□□ 0.43
Sh3rf3Q8C120 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Sh3rf3Q8C120 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Sh3rf3Q8C120 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Sh3rf3Q8C120 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Sh3rf3Q8C120 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC17.75■□□□□ 0.43
Sh3rf3Q8C120 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Sh3rf3Q8C120 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC17.75■□□□□ 0.43
Sh3rf3Q8C120 Gm38027-201ENSMUST00000192315 235 ntBASIC17.75■□□□□ 0.43
Sh3rf3Q8C120 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC17.75■□□□□ 0.43
Sh3rf3Q8C120 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Sh3rf3Q8C120 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Sh3rf3Q8C120 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC17.75■□□□□ 0.43
Sh3rf3Q8C120 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
Sh3rf3Q8C120 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
Sh3rf3Q8C120 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Sh3rf3Q8C120 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Sh3rf3Q8C120 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Sh3rf3Q8C120 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC17.74■□□□□ 0.43
Sh3rf3Q8C120 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC17.74■□□□□ 0.43
Sh3rf3Q8C120 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Sh3rf3Q8C120 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
Sh3rf3Q8C120 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Sh3rf3Q8C120 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Sh3rf3Q8C120 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
Sh3rf3Q8C120 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Sh3rf3Q8C120 Mir5122-201ENSMUST00000175004 89 ntBASIC17.74■□□□□ 0.43
Sh3rf3Q8C120 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Sh3rf3Q8C120 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
Sh3rf3Q8C120 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Sh3rf3Q8C120 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Sh3rf3Q8C120 Cxcl14-202ENSMUST00000224801 1467 ntBASIC17.74■□□□□ 0.43
Sh3rf3Q8C120 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Sh3rf3Q8C120 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Sh3rf3Q8C120 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC17.74■□□□□ 0.43
Sh3rf3Q8C120 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Sh3rf3Q8C120 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC17.73■□□□□ 0.43
Sh3rf3Q8C120 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Sh3rf3Q8C120 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC17.73■□□□□ 0.43
Sh3rf3Q8C120 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Sh3rf3Q8C120 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC17.73■□□□□ 0.43
Sh3rf3Q8C120 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Sh3rf3Q8C120 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Sh3rf3Q8C120 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Sh3rf3Q8C120 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Sh3rf3Q8C120 Tfap2a-209ENSMUST00000225180 1828 ntBASIC17.73■□□□□ 0.43
Sh3rf3Q8C120 AC156016.1-201ENSMUST00000227190 1035 ntBASIC17.73■□□□□ 0.43
Sh3rf3Q8C120 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Sh3rf3Q8C120 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Sh3rf3Q8C120 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Sh3rf3Q8C120 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
Sh3rf3Q8C120 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Sh3rf3Q8C120 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Sh3rf3Q8C120 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Sh3rf3Q8C120 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Sh3rf3Q8C120 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Sh3rf3Q8C120 Gm20628-201ENSMUST00000177363 3215 ntBASIC17.72■□□□□ 0.43
Sh3rf3Q8C120 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Sh3rf3Q8C120 Gm10461-201ENSMUST00000202073 4786 ntBASIC17.72■□□□□ 0.43
Sh3rf3Q8C120 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Sh3rf3Q8C120 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Sh3rf3Q8C120 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
Sh3rf3Q8C120 Gm7638-201ENSMUST00000121348 967 ntBASIC17.72■□□□□ 0.43
Sh3rf3Q8C120 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC17.72■□□□□ 0.43
Sh3rf3Q8C120 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Sh3rf3Q8C120 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Sh3rf3Q8C120 Arhgef4-208ENSMUST00000211073 171 ntBASIC17.72■□□□□ 0.43
Sh3rf3Q8C120 Timm23-208ENSMUST00000226683 750 ntBASIC17.72■□□□□ 0.43
Sh3rf3Q8C120 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
Sh3rf3Q8C120 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Sh3rf3Q8C120 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC17.72■□□□□ 0.43
Sh3rf3Q8C120 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Sh3rf3Q8C120 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Sh3rf3Q8C120 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Sh3rf3Q8C120 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Sh3rf3Q8C120 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Sh3rf3Q8C120 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Sh3rf3Q8C120 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Sh3rf3Q8C120 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Sh3rf3Q8C120 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Sh3rf3Q8C120 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Sh3rf3Q8C120 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Sh3rf3Q8C120 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 20.6 ms