Protein–RNA interactions for Protein: Q8C0Q4

Nek11, Serine/threonine-protein kinase Nek11, mousemouse

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nek11Q8C0Q4 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
Nek11Q8C0Q4 AL590614.2-201ENSMUST00000225374 1937 ntBASIC20.22■□□□□ 0.83
Nek11Q8C0Q4 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
Nek11Q8C0Q4 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC20.22■□□□□ 0.83
Nek11Q8C0Q4 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Nek11Q8C0Q4 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Nek11Q8C0Q4 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
Nek11Q8C0Q4 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Nek11Q8C0Q4 AC154855.1-201ENSMUST00000227353 1458 ntBASIC20.22■□□□□ 0.83
Nek11Q8C0Q4 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Nek11Q8C0Q4 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Nek11Q8C0Q4 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Nek11Q8C0Q4 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Nek11Q8C0Q4 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Nek11Q8C0Q4 Gm8668-201ENSMUST00000120559 1447 ntBASIC20.21■□□□□ 0.83
Nek11Q8C0Q4 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
Nek11Q8C0Q4 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Nek11Q8C0Q4 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Nek11Q8C0Q4 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Nek11Q8C0Q4 Gm7889-201ENSMUST00000185591 958 ntBASIC20.21■□□□□ 0.83
Nek11Q8C0Q4 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Nek11Q8C0Q4 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
Nek11Q8C0Q4 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Nek11Q8C0Q4 Gm16401-202ENSMUST00000197463 2074 ntBASIC20.21■□□□□ 0.83
Nek11Q8C0Q4 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC20.21■□□□□ 0.83
Nek11Q8C0Q4 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Nek11Q8C0Q4 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC20.21■□□□□ 0.83
Nek11Q8C0Q4 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Nek11Q8C0Q4 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
Nek11Q8C0Q4 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Nek11Q8C0Q4 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Nek11Q8C0Q4 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Nek11Q8C0Q4 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Nek11Q8C0Q4 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC20.2■□□□□ 0.82
Nek11Q8C0Q4 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Nek11Q8C0Q4 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Nek11Q8C0Q4 AC159205.6-201ENSMUST00000224935 887 ntBASIC20.2■□□□□ 0.82
Nek11Q8C0Q4 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
Nek11Q8C0Q4 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
Nek11Q8C0Q4 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Nek11Q8C0Q4 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Nek11Q8C0Q4 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Nek11Q8C0Q4 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Nek11Q8C0Q4 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Nek11Q8C0Q4 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Nek11Q8C0Q4 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Nek11Q8C0Q4 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC20.19■□□□□ 0.82
Nek11Q8C0Q4 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Nek11Q8C0Q4 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Nek11Q8C0Q4 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Nek11Q8C0Q4 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC20.19■□□□□ 0.82
Nek11Q8C0Q4 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Nek11Q8C0Q4 AC153881.2-201ENSMUST00000214877 204 ntBASIC20.19■□□□□ 0.82
Nek11Q8C0Q4 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
Nek11Q8C0Q4 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
Nek11Q8C0Q4 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
Nek11Q8C0Q4 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Nek11Q8C0Q4 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Nek11Q8C0Q4 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
Nek11Q8C0Q4 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
Nek11Q8C0Q4 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Nek11Q8C0Q4 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
Nek11Q8C0Q4 Gm16061-201ENSMUST00000122167 857 ntBASIC20.18■□□□□ 0.82
Nek11Q8C0Q4 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC20.18■□□□□ 0.82
Nek11Q8C0Q4 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
Nek11Q8C0Q4 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC20.18■□□□□ 0.82
Nek11Q8C0Q4 Krtap5-1-202ENSMUST00000188274 742 ntBASIC20.18■□□□□ 0.82
Nek11Q8C0Q4 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Nek11Q8C0Q4 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
Nek11Q8C0Q4 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
Nek11Q8C0Q4 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Nek11Q8C0Q4 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Nek11Q8C0Q4 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Nek11Q8C0Q4 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Nek11Q8C0Q4 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Nek11Q8C0Q4 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Nek11Q8C0Q4 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Nek11Q8C0Q4 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Nek11Q8C0Q4 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC20.17■□□□□ 0.82
Nek11Q8C0Q4 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
Nek11Q8C0Q4 Gm6433-201ENSMUST00000118634 875 ntBASIC20.17■□□□□ 0.82
Nek11Q8C0Q4 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC20.17■□□□□ 0.82
Nek11Q8C0Q4 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC20.17■□□□□ 0.82
Nek11Q8C0Q4 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC20.17■□□□□ 0.82
Nek11Q8C0Q4 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC20.17■□□□□ 0.82
Nek11Q8C0Q4 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Nek11Q8C0Q4 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
Nek11Q8C0Q4 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Nek11Q8C0Q4 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Nek11Q8C0Q4 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Nek11Q8C0Q4 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Nek11Q8C0Q4 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
Nek11Q8C0Q4 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Nek11Q8C0Q4 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Nek11Q8C0Q4 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC20.16■□□□□ 0.82
Nek11Q8C0Q4 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Nek11Q8C0Q4 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Nek11Q8C0Q4 Gm11841-201ENSMUST00000117060 1963 ntBASIC20.16■□□□□ 0.82
Nek11Q8C0Q4 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC20.16■□□□□ 0.82
Nek11Q8C0Q4 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 21.5 ms