Protein–RNA interactions for Protein: Q8C0D0

Trub1, Probable tRNA pseudouridine synthase 1, mousemouse

Known RBP Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trub1Q8C0D0 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Trub1Q8C0D0 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trub1Q8C0D0 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Trub1Q8C0D0 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC17.59■□□□□ 0.41
Trub1Q8C0D0 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trub1Q8C0D0 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trub1Q8C0D0 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trub1Q8C0D0 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trub1Q8C0D0 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Trub1Q8C0D0 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC17.59■□□□□ 0.41
Trub1Q8C0D0 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trub1Q8C0D0 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trub1Q8C0D0 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Trub1Q8C0D0 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trub1Q8C0D0 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC17.59■□□□□ 0.41
Trub1Q8C0D0 AC120002.2-201ENSMUST00000220205 773 ntBASIC17.59■□□□□ 0.41
Trub1Q8C0D0 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trub1Q8C0D0 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trub1Q8C0D0 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC17.59■□□□□ 0.41
Trub1Q8C0D0 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.41
Trub1Q8C0D0 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.41
Trub1Q8C0D0 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Trub1Q8C0D0 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Trub1Q8C0D0 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Trub1Q8C0D0 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC17.58■□□□□ 0.4
Trub1Q8C0D0 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Trub1Q8C0D0 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC17.58■□□□□ 0.4
Trub1Q8C0D0 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC17.58■□□□□ 0.4
Trub1Q8C0D0 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Trub1Q8C0D0 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Trub1Q8C0D0 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
Trub1Q8C0D0 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
Trub1Q8C0D0 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Trub1Q8C0D0 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Trub1Q8C0D0 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Trub1Q8C0D0 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC17.57■□□□□ 0.4
Trub1Q8C0D0 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trub1Q8C0D0 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trub1Q8C0D0 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trub1Q8C0D0 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trub1Q8C0D0 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
Trub1Q8C0D0 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trub1Q8C0D0 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Trub1Q8C0D0 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trub1Q8C0D0 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trub1Q8C0D0 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC17.57■□□□□ 0.4
Trub1Q8C0D0 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC17.57■□□□□ 0.4
Trub1Q8C0D0 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trub1Q8C0D0 Gm7791-201ENSMUST00000219066 539 ntBASIC17.57■□□□□ 0.4
Trub1Q8C0D0 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trub1Q8C0D0 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trub1Q8C0D0 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trub1Q8C0D0 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trub1Q8C0D0 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trub1Q8C0D0 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Trub1Q8C0D0 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trub1Q8C0D0 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC17.56■□□□□ 0.4
Trub1Q8C0D0 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
Trub1Q8C0D0 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trub1Q8C0D0 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
Trub1Q8C0D0 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trub1Q8C0D0 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trub1Q8C0D0 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trub1Q8C0D0 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Trub1Q8C0D0 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trub1Q8C0D0 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trub1Q8C0D0 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Trub1Q8C0D0 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Trub1Q8C0D0 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trub1Q8C0D0 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC17.56■□□□□ 0.4
Trub1Q8C0D0 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Trub1Q8C0D0 Gm27000-201ENSMUST00000182943 842 ntBASIC17.56■□□□□ 0.4
Trub1Q8C0D0 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
Trub1Q8C0D0 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC17.56■□□□□ 0.4
Trub1Q8C0D0 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Trub1Q8C0D0 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC17.56■□□□□ 0.4
Trub1Q8C0D0 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Trub1Q8C0D0 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trub1Q8C0D0 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Trub1Q8C0D0 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Trub1Q8C0D0 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC17.55■□□□□ 0.4
Trub1Q8C0D0 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trub1Q8C0D0 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trub1Q8C0D0 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trub1Q8C0D0 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trub1Q8C0D0 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trub1Q8C0D0 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Trub1Q8C0D0 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trub1Q8C0D0 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC17.55■□□□□ 0.4
Trub1Q8C0D0 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC17.55■□□□□ 0.4
Trub1Q8C0D0 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trub1Q8C0D0 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trub1Q8C0D0 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Trub1Q8C0D0 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC17.55■□□□□ 0.4
Trub1Q8C0D0 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trub1Q8C0D0 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
Trub1Q8C0D0 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trub1Q8C0D0 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trub1Q8C0D0 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Trub1Q8C0D0 AL590614.2-201ENSMUST00000225374 1937 ntBASIC17.55■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 38.8 ms