Protein–RNA interactions for Protein: Q8BZT2

Sh3rf2, Putative E3 ubiquitin-protein ligase SH3RF2, mousemouse

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf2Q8BZT2 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Sh3rf2Q8BZT2 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Sh3rf2Q8BZT2 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC17.29■□□□□ 0.36
Sh3rf2Q8BZT2 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Sh3rf2Q8BZT2 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Sh3rf2Q8BZT2 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Sh3rf2Q8BZT2 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Sh3rf2Q8BZT2 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Sh3rf2Q8BZT2 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC17.29■□□□□ 0.36
Sh3rf2Q8BZT2 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Sh3rf2Q8BZT2 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Sh3rf2Q8BZT2 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Sh3rf2Q8BZT2 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC17.29■□□□□ 0.36
Sh3rf2Q8BZT2 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Sh3rf2Q8BZT2 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Sh3rf2Q8BZT2 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Sh3rf2Q8BZT2 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC17.29■□□□□ 0.36
Sh3rf2Q8BZT2 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC17.29■□□□□ 0.36
Sh3rf2Q8BZT2 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Sh3rf2Q8BZT2 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC17.29■□□□□ 0.36
Sh3rf2Q8BZT2 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC17.29■□□□□ 0.36
Sh3rf2Q8BZT2 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC17.29■□□□□ 0.36
Sh3rf2Q8BZT2 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Sh3rf2Q8BZT2 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Sh3rf2Q8BZT2 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Sh3rf2Q8BZT2 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
Sh3rf2Q8BZT2 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Sh3rf2Q8BZT2 Gm6623-201ENSMUST00000173570 544 ntBASIC17.28■□□□□ 0.36
Sh3rf2Q8BZT2 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC17.28■□□□□ 0.36
Sh3rf2Q8BZT2 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Sh3rf2Q8BZT2 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Sh3rf2Q8BZT2 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Sh3rf2Q8BZT2 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Sh3rf2Q8BZT2 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Sh3rf2Q8BZT2 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Sh3rf2Q8BZT2 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Sh3rf2Q8BZT2 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC17.28■□□□□ 0.36
Sh3rf2Q8BZT2 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Sh3rf2Q8BZT2 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Sh3rf2Q8BZT2 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Sh3rf2Q8BZT2 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC17.27■□□□□ 0.36
Sh3rf2Q8BZT2 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Sh3rf2Q8BZT2 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC17.27■□□□□ 0.36
Sh3rf2Q8BZT2 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Sh3rf2Q8BZT2 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Sh3rf2Q8BZT2 Mir770-201ENSMUST00000103252 94 ntBASIC17.27■□□□□ 0.36
Sh3rf2Q8BZT2 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Sh3rf2Q8BZT2 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
Sh3rf2Q8BZT2 AC122351.1-201ENSMUST00000220467 126 ntBASIC17.27■□□□□ 0.36
Sh3rf2Q8BZT2 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
Sh3rf2Q8BZT2 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Sh3rf2Q8BZT2 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Sh3rf2Q8BZT2 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Sh3rf2Q8BZT2 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Sh3rf2Q8BZT2 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Sh3rf2Q8BZT2 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC17.26■□□□□ 0.35
Sh3rf2Q8BZT2 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC17.26■□□□□ 0.35
Sh3rf2Q8BZT2 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Sh3rf2Q8BZT2 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
Sh3rf2Q8BZT2 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Sh3rf2Q8BZT2 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC17.26■□□□□ 0.35
Sh3rf2Q8BZT2 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC17.26■□□□□ 0.35
Sh3rf2Q8BZT2 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Sh3rf2Q8BZT2 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Sh3rf2Q8BZT2 Gm37194-201ENSMUST00000193092 3031 ntBASIC17.26■□□□□ 0.35
Sh3rf2Q8BZT2 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC17.26■□□□□ 0.35
Sh3rf2Q8BZT2 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Sh3rf2Q8BZT2 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
Sh3rf2Q8BZT2 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Sh3rf2Q8BZT2 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Sh3rf2Q8BZT2 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Sh3rf2Q8BZT2 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Sh3rf2Q8BZT2 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
Sh3rf2Q8BZT2 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Sh3rf2Q8BZT2 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC17.25■□□□□ 0.35
Sh3rf2Q8BZT2 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Sh3rf2Q8BZT2 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC17.25■□□□□ 0.35
Sh3rf2Q8BZT2 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC17.25■□□□□ 0.35
Sh3rf2Q8BZT2 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Sh3rf2Q8BZT2 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC17.25■□□□□ 0.35
Sh3rf2Q8BZT2 AC130713.1-201ENSMUST00000228853 1096 ntBASIC17.25■□□□□ 0.35
Sh3rf2Q8BZT2 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Sh3rf2Q8BZT2 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Sh3rf2Q8BZT2 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Sh3rf2Q8BZT2 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Sh3rf2Q8BZT2 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Sh3rf2Q8BZT2 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Sh3rf2Q8BZT2 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Sh3rf2Q8BZT2 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Sh3rf2Q8BZT2 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC17.24■□□□□ 0.35
Sh3rf2Q8BZT2 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Sh3rf2Q8BZT2 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Sh3rf2Q8BZT2 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
Sh3rf2Q8BZT2 Gm44832-201ENSMUST00000208849 2303 ntBASIC17.24■□□□□ 0.35
Sh3rf2Q8BZT2 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Sh3rf2Q8BZT2 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Sh3rf2Q8BZT2 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Sh3rf2Q8BZT2 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Sh3rf2Q8BZT2 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC17.24■□□□□ 0.35
Sh3rf2Q8BZT2 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 23.7 ms