Protein–RNA interactions for Protein: Q8BX39

Cphx2, Cytoplasmic polyadenylated homeobox, mousemouse

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cphx2Q8BX39 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cphx2Q8BX39 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC13.03□□□□□ -0.32
Cphx2Q8BX39 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC13.03□□□□□ -0.32
Cphx2Q8BX39 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cphx2Q8BX39 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC13.03□□□□□ -0.32
Cphx2Q8BX39 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cphx2Q8BX39 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cphx2Q8BX39 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cphx2Q8BX39 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC13.03□□□□□ -0.32
Cphx2Q8BX39 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC13.03□□□□□ -0.32
Cphx2Q8BX39 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
Cphx2Q8BX39 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC13.03□□□□□ -0.32
Cphx2Q8BX39 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cphx2Q8BX39 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC13.03□□□□□ -0.32
Cphx2Q8BX39 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cphx2Q8BX39 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cphx2Q8BX39 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cphx2Q8BX39 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cphx2Q8BX39 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cphx2Q8BX39 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cphx2Q8BX39 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Cphx2Q8BX39 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC13.03□□□□□ -0.32
Cphx2Q8BX39 Anks1-201ENSMUST00000025058 6844 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cphx2Q8BX39 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cphx2Q8BX39 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cphx2Q8BX39 AC131586.2-201ENSMUST00000228370 1512 ntBASIC13.03□□□□□ -0.32
Cphx2Q8BX39 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cphx2Q8BX39 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cphx2Q8BX39 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cphx2Q8BX39 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Cphx2Q8BX39 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Cphx2Q8BX39 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.32
Cphx2Q8BX39 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Cphx2Q8BX39 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC13.02□□□□□ -0.32
Cphx2Q8BX39 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Cphx2Q8BX39 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Cphx2Q8BX39 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Cphx2Q8BX39 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Cphx2Q8BX39 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Cphx2Q8BX39 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Cphx2Q8BX39 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Cphx2Q8BX39 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Cphx2Q8BX39 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Cphx2Q8BX39 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC13.02□□□□□ -0.33
Cphx2Q8BX39 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Cphx2Q8BX39 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Cphx2Q8BX39 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Cphx2Q8BX39 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
Cphx2Q8BX39 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cphx2Q8BX39 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cphx2Q8BX39 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cphx2Q8BX39 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cphx2Q8BX39 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cphx2Q8BX39 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Cphx2Q8BX39 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC13.01□□□□□ -0.33
Cphx2Q8BX39 Zkscan3-208ENSMUST00000224820 5398 ntBASIC13.01□□□□□ -0.33
Cphx2Q8BX39 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Cphx2Q8BX39 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC13.01□□□□□ -0.33
Cphx2Q8BX39 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC13.01□□□□□ -0.33
Cphx2Q8BX39 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC13.01□□□□□ -0.33
Cphx2Q8BX39 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC13.01□□□□□ -0.33
Cphx2Q8BX39 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cphx2Q8BX39 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Cphx2Q8BX39 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cphx2Q8BX39 Gm10655-201ENSMUST00000098658 1397 ntBASIC13.01□□□□□ -0.33
Cphx2Q8BX39 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cphx2Q8BX39 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cphx2Q8BX39 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC13.01□□□□□ -0.33
Cphx2Q8BX39 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cphx2Q8BX39 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cphx2Q8BX39 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Cphx2Q8BX39 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Cphx2Q8BX39 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Cphx2Q8BX39 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC13.01□□□□□ -0.33
Cphx2Q8BX39 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cphx2Q8BX39 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Cphx2Q8BX39 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Cphx2Q8BX39 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC13□□□□□ -0.33
Cphx2Q8BX39 Arhgef12-202ENSMUST00000165665 10752 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Cphx2Q8BX39 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Cphx2Q8BX39 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Cphx2Q8BX39 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Cphx2Q8BX39 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Cphx2Q8BX39 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Cphx2Q8BX39 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Cphx2Q8BX39 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Cphx2Q8BX39 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC13□□□□□ -0.33
Cphx2Q8BX39 Gm37563-201ENSMUST00000192580 1513 ntBASIC13□□□□□ -0.33
Cphx2Q8BX39 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Cphx2Q8BX39 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Cphx2Q8BX39 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Cphx2Q8BX39 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Cphx2Q8BX39 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC13□□□□□ -0.33
Cphx2Q8BX39 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC13□□□□□ -0.33
Cphx2Q8BX39 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Cphx2Q8BX39 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Cphx2Q8BX39 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Cphx2Q8BX39 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Cphx2Q8BX39 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Cphx2Q8BX39 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC13□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 28.5 ms