Protein–RNA interactions for Protein: Q8BUE1

Slc9a4, Sodium/hydrogen exchanger 4, mousemouse

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc9a4Q8BUE1 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Slc9a4Q8BUE1 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Slc9a4Q8BUE1 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Slc9a4Q8BUE1 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC17.82■□□□□ 0.44
Slc9a4Q8BUE1 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Slc9a4Q8BUE1 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Slc9a4Q8BUE1 Gm7889-201ENSMUST00000185591 958 ntBASIC17.82■□□□□ 0.44
Slc9a4Q8BUE1 Gm7370-201ENSMUST00000219471 767 ntBASIC17.82■□□□□ 0.44
Slc9a4Q8BUE1 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Slc9a4Q8BUE1 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Slc9a4Q8BUE1 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
Slc9a4Q8BUE1 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
Slc9a4Q8BUE1 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Slc9a4Q8BUE1 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
Slc9a4Q8BUE1 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC17.81■□□□□ 0.44
Slc9a4Q8BUE1 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Slc9a4Q8BUE1 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Slc9a4Q8BUE1 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Slc9a4Q8BUE1 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Slc9a4Q8BUE1 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
Slc9a4Q8BUE1 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC17.81■□□□□ 0.44
Slc9a4Q8BUE1 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Slc9a4Q8BUE1 AC153881.2-201ENSMUST00000214877 204 ntBASIC17.81■□□□□ 0.44
Slc9a4Q8BUE1 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
Slc9a4Q8BUE1 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
Slc9a4Q8BUE1 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
Slc9a4Q8BUE1 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Slc9a4Q8BUE1 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Slc9a4Q8BUE1 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Slc9a4Q8BUE1 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Slc9a4Q8BUE1 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
Slc9a4Q8BUE1 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
Slc9a4Q8BUE1 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
Slc9a4Q8BUE1 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
Slc9a4Q8BUE1 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Slc9a4Q8BUE1 Krtap5-1-202ENSMUST00000188274 742 ntBASIC17.8■□□□□ 0.44
Slc9a4Q8BUE1 AC159205.6-201ENSMUST00000224935 887 ntBASIC17.8■□□□□ 0.44
Slc9a4Q8BUE1 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Slc9a4Q8BUE1 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Slc9a4Q8BUE1 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
Slc9a4Q8BUE1 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC17.8■□□□□ 0.44
Slc9a4Q8BUE1 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Slc9a4Q8BUE1 AC154855.1-201ENSMUST00000227353 1458 ntBASIC17.8■□□□□ 0.44
Slc9a4Q8BUE1 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Slc9a4Q8BUE1 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Slc9a4Q8BUE1 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Slc9a4Q8BUE1 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Slc9a4Q8BUE1 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
Slc9a4Q8BUE1 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Slc9a4Q8BUE1 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
Slc9a4Q8BUE1 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
Slc9a4Q8BUE1 Gm6433-201ENSMUST00000118634 875 ntBASIC17.79■□□□□ 0.44
Slc9a4Q8BUE1 Gm16061-201ENSMUST00000122167 857 ntBASIC17.79■□□□□ 0.44
Slc9a4Q8BUE1 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC17.79■□□□□ 0.44
Slc9a4Q8BUE1 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC17.79■□□□□ 0.44
Slc9a4Q8BUE1 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC17.79■□□□□ 0.44
Slc9a4Q8BUE1 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC17.79■□□□□ 0.44
Slc9a4Q8BUE1 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Slc9a4Q8BUE1 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
Slc9a4Q8BUE1 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC17.79■□□□□ 0.44
Slc9a4Q8BUE1 Gm19439-201ENSMUST00000198195 2273 ntBASIC17.79■□□□□ 0.44
Slc9a4Q8BUE1 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Slc9a4Q8BUE1 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
Slc9a4Q8BUE1 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Slc9a4Q8BUE1 AL590614.2-201ENSMUST00000225374 1937 ntBASIC17.78■□□□□ 0.44
Slc9a4Q8BUE1 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
Slc9a4Q8BUE1 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
Slc9a4Q8BUE1 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Slc9a4Q8BUE1 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Slc9a4Q8BUE1 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Slc9a4Q8BUE1 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Slc9a4Q8BUE1 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Slc9a4Q8BUE1 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Slc9a4Q8BUE1 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
Slc9a4Q8BUE1 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
Slc9a4Q8BUE1 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
Slc9a4Q8BUE1 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Slc9a4Q8BUE1 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
Slc9a4Q8BUE1 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Slc9a4Q8BUE1 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
Slc9a4Q8BUE1 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Slc9a4Q8BUE1 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
Slc9a4Q8BUE1 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Slc9a4Q8BUE1 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
Slc9a4Q8BUE1 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Slc9a4Q8BUE1 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Slc9a4Q8BUE1 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Slc9a4Q8BUE1 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Slc9a4Q8BUE1 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Slc9a4Q8BUE1 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC17.77■□□□□ 0.44
Slc9a4Q8BUE1 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC17.77■□□□□ 0.44
Slc9a4Q8BUE1 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
Slc9a4Q8BUE1 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Slc9a4Q8BUE1 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC17.77■□□□□ 0.44
Slc9a4Q8BUE1 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Slc9a4Q8BUE1 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Slc9a4Q8BUE1 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Slc9a4Q8BUE1 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Slc9a4Q8BUE1 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Slc9a4Q8BUE1 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 19 ms