Protein–RNA interactions for Protein: Q8BRF7

Scfd1, Sec1 family domain-containing protein 1, mousemouse

Known RBP Predictions only

Length 639 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scfd1Q8BRF7 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Scfd1Q8BRF7 Gm45328-201ENSMUST00000210942 917 ntBASIC19.5■□□□□ 0.71
Scfd1Q8BRF7 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Scfd1Q8BRF7 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Scfd1Q8BRF7 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
Scfd1Q8BRF7 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Scfd1Q8BRF7 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Scfd1Q8BRF7 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Scfd1Q8BRF7 Phf7-203ENSMUST00000226565 1971 ntBASIC19.5■□□□□ 0.71
Scfd1Q8BRF7 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC19.5■□□□□ 0.71
Scfd1Q8BRF7 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
Scfd1Q8BRF7 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Scfd1Q8BRF7 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Scfd1Q8BRF7 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Scfd1Q8BRF7 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
Scfd1Q8BRF7 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Scfd1Q8BRF7 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Scfd1Q8BRF7 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Scfd1Q8BRF7 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC19.49■□□□□ 0.71
Scfd1Q8BRF7 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Scfd1Q8BRF7 Gm17807-201ENSMUST00000186869 298 ntBASIC19.49■□□□□ 0.71
Scfd1Q8BRF7 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Scfd1Q8BRF7 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC19.49■□□□□ 0.71
Scfd1Q8BRF7 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
Scfd1Q8BRF7 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Scfd1Q8BRF7 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Scfd1Q8BRF7 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Scfd1Q8BRF7 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC19.48■□□□□ 0.71
Scfd1Q8BRF7 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
Scfd1Q8BRF7 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
Scfd1Q8BRF7 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Scfd1Q8BRF7 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
Scfd1Q8BRF7 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Scfd1Q8BRF7 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Scfd1Q8BRF7 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Scfd1Q8BRF7 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Scfd1Q8BRF7 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Scfd1Q8BRF7 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Scfd1Q8BRF7 Zcchc6-207ENSMUST00000225576 2499 ntBASIC19.48■□□□□ 0.71
Scfd1Q8BRF7 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
Scfd1Q8BRF7 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC19.48■□□□□ 0.71
Scfd1Q8BRF7 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Scfd1Q8BRF7 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Scfd1Q8BRF7 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC19.47■□□□□ 0.71
Scfd1Q8BRF7 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
Scfd1Q8BRF7 Gm6190-201ENSMUST00000220683 1374 ntBASIC19.47■□□□□ 0.71
Scfd1Q8BRF7 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Scfd1Q8BRF7 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Scfd1Q8BRF7 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Scfd1Q8BRF7 Tfap2a-209ENSMUST00000225180 1828 ntBASIC19.47■□□□□ 0.71
Scfd1Q8BRF7 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC19.47■□□□□ 0.71
Scfd1Q8BRF7 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Scfd1Q8BRF7 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC19.47■□□□□ 0.71
Scfd1Q8BRF7 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Scfd1Q8BRF7 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC19.47■□□□□ 0.71
Scfd1Q8BRF7 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Scfd1Q8BRF7 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Scfd1Q8BRF7 Gm27742-201ENSMUST00000184667 60 ntBASIC19.47■□□□□ 0.71
Scfd1Q8BRF7 Gm18115-201ENSMUST00000221209 621 ntBASIC19.47■□□□□ 0.71
Scfd1Q8BRF7 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Scfd1Q8BRF7 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Scfd1Q8BRF7 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Scfd1Q8BRF7 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Scfd1Q8BRF7 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Scfd1Q8BRF7 Wnt10b-204ENSMUST00000226655 1807 ntBASIC19.46■□□□□ 0.71
Scfd1Q8BRF7 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Scfd1Q8BRF7 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Scfd1Q8BRF7 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Scfd1Q8BRF7 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
Scfd1Q8BRF7 Fcho2-208ENSMUST00000224992 2964 ntBASIC19.46■□□□□ 0.71
Scfd1Q8BRF7 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
Scfd1Q8BRF7 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC19.46■□□□□ 0.71
Scfd1Q8BRF7 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC19.46■□□□□ 0.71
Scfd1Q8BRF7 AC159205.3-201ENSMUST00000224614 874 ntBASIC19.46■□□□□ 0.71
Scfd1Q8BRF7 Otx2os1-206ENSMUST00000228153 787 ntBASIC19.46■□□□□ 0.71
Scfd1Q8BRF7 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Scfd1Q8BRF7 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Scfd1Q8BRF7 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Scfd1Q8BRF7 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Scfd1Q8BRF7 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
Scfd1Q8BRF7 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Scfd1Q8BRF7 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC19.46■□□□□ 0.71
Scfd1Q8BRF7 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC19.46■□□□□ 0.71
Scfd1Q8BRF7 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Scfd1Q8BRF7 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Scfd1Q8BRF7 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Scfd1Q8BRF7 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC19.45■□□□□ 0.7
Scfd1Q8BRF7 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Scfd1Q8BRF7 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Scfd1Q8BRF7 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Scfd1Q8BRF7 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Scfd1Q8BRF7 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Scfd1Q8BRF7 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Scfd1Q8BRF7 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Scfd1Q8BRF7 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Scfd1Q8BRF7 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
Scfd1Q8BRF7 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Scfd1Q8BRF7 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Scfd1Q8BRF7 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Scfd1Q8BRF7 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 35.8 ms