Protein–RNA interactions for Protein: Q8BP01

Vmac, Vimentin-type intermediate filament-associated coiled-coil protein, mousemouse

Predictions only

Length 174 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VmacQ8BP01 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC19.62■□□□□ 0.73
VmacQ8BP01 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
VmacQ8BP01 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
VmacQ8BP01 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
VmacQ8BP01 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
VmacQ8BP01 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
VmacQ8BP01 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
VmacQ8BP01 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
VmacQ8BP01 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
VmacQ8BP01 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
VmacQ8BP01 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
VmacQ8BP01 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
VmacQ8BP01 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC19.61■□□□□ 0.73
VmacQ8BP01 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
VmacQ8BP01 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC19.61■□□□□ 0.73
VmacQ8BP01 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC19.61■□□□□ 0.73
VmacQ8BP01 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC19.61■□□□□ 0.73
VmacQ8BP01 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
VmacQ8BP01 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC19.61■□□□□ 0.73
VmacQ8BP01 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
VmacQ8BP01 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC19.61■□□□□ 0.73
VmacQ8BP01 AC159205.6-201ENSMUST00000224935 887 ntBASIC19.61■□□□□ 0.73
VmacQ8BP01 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
VmacQ8BP01 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
VmacQ8BP01 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
VmacQ8BP01 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
VmacQ8BP01 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
VmacQ8BP01 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
VmacQ8BP01 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
VmacQ8BP01 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
VmacQ8BP01 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
VmacQ8BP01 Gm8668-201ENSMUST00000120559 1447 ntBASIC19.6■□□□□ 0.73
VmacQ8BP01 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
VmacQ8BP01 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC19.6■□□□□ 0.73
VmacQ8BP01 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
VmacQ8BP01 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
VmacQ8BP01 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
VmacQ8BP01 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
VmacQ8BP01 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
VmacQ8BP01 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
VmacQ8BP01 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
VmacQ8BP01 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC19.6■□□□□ 0.73
VmacQ8BP01 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC19.6■□□□□ 0.73
VmacQ8BP01 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
VmacQ8BP01 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
VmacQ8BP01 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
VmacQ8BP01 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC19.6■□□□□ 0.73
VmacQ8BP01 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
VmacQ8BP01 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
VmacQ8BP01 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC19.59■□□□□ 0.73
VmacQ8BP01 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC19.59■□□□□ 0.73
VmacQ8BP01 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
VmacQ8BP01 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
VmacQ8BP01 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
VmacQ8BP01 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
VmacQ8BP01 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC19.59■□□□□ 0.73
VmacQ8BP01 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
VmacQ8BP01 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC19.59■□□□□ 0.73
VmacQ8BP01 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
VmacQ8BP01 Gm7889-201ENSMUST00000185591 958 ntBASIC19.59■□□□□ 0.73
VmacQ8BP01 Gm29994-201ENSMUST00000195495 1193 ntBASIC19.59■□□□□ 0.73
VmacQ8BP01 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC19.59■□□□□ 0.73
VmacQ8BP01 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
VmacQ8BP01 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
VmacQ8BP01 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
VmacQ8BP01 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC19.58■□□□□ 0.73
VmacQ8BP01 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.73
VmacQ8BP01 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
VmacQ8BP01 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.73
VmacQ8BP01 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC19.58■□□□□ 0.72
VmacQ8BP01 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
VmacQ8BP01 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC19.58■□□□□ 0.72
VmacQ8BP01 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
VmacQ8BP01 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
VmacQ8BP01 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
VmacQ8BP01 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
VmacQ8BP01 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.72
VmacQ8BP01 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
VmacQ8BP01 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
VmacQ8BP01 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
VmacQ8BP01 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
VmacQ8BP01 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
VmacQ8BP01 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
VmacQ8BP01 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
VmacQ8BP01 Spsb2-203ENSMUST00000112473 1322 ntBASIC19.57■□□□□ 0.72
VmacQ8BP01 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
VmacQ8BP01 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
VmacQ8BP01 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
VmacQ8BP01 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
VmacQ8BP01 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
VmacQ8BP01 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC19.57■□□□□ 0.72
VmacQ8BP01 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
VmacQ8BP01 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
VmacQ8BP01 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
VmacQ8BP01 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
VmacQ8BP01 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
VmacQ8BP01 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
VmacQ8BP01 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC19.57■□□□□ 0.72
VmacQ8BP01 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
VmacQ8BP01 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 22.3 ms