Protein–RNA interactions for Protein: Q8BJF9

Chmp2b, Charged multivesicular body protein 2b, mousemouse

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2bQ8BJF9 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Chmp2bQ8BJF9 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Chmp2bQ8BJF9 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC17.47■□□□□ 0.39
Chmp2bQ8BJF9 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
Chmp2bQ8BJF9 AC163280.1-201ENSMUST00000228194 1100 ntBASIC17.47■□□□□ 0.39
Chmp2bQ8BJF9 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Chmp2bQ8BJF9 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Chmp2bQ8BJF9 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Chmp2bQ8BJF9 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Chmp2bQ8BJF9 Gm11841-201ENSMUST00000117060 1963 ntBASIC17.47■□□□□ 0.39
Chmp2bQ8BJF9 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Chmp2bQ8BJF9 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
Chmp2bQ8BJF9 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Chmp2bQ8BJF9 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC17.47■□□□□ 0.39
Chmp2bQ8BJF9 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
Chmp2bQ8BJF9 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
Chmp2bQ8BJF9 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Chmp2bQ8BJF9 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Chmp2bQ8BJF9 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Chmp2bQ8BJF9 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Chmp2bQ8BJF9 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Chmp2bQ8BJF9 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Chmp2bQ8BJF9 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Chmp2bQ8BJF9 Gm11249-201ENSMUST00000117071 859 ntBASIC17.46■□□□□ 0.39
Chmp2bQ8BJF9 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC17.46■□□□□ 0.39
Chmp2bQ8BJF9 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC17.46■□□□□ 0.39
Chmp2bQ8BJF9 Gm3807-201ENSMUST00000193520 1168 ntBASIC17.46■□□□□ 0.39
Chmp2bQ8BJF9 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC17.46■□□□□ 0.39
Chmp2bQ8BJF9 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
Chmp2bQ8BJF9 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Chmp2bQ8BJF9 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Chmp2bQ8BJF9 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Chmp2bQ8BJF9 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Chmp2bQ8BJF9 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
Chmp2bQ8BJF9 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Chmp2bQ8BJF9 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Chmp2bQ8BJF9 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Chmp2bQ8BJF9 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Chmp2bQ8BJF9 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.38
Chmp2bQ8BJF9 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Chmp2bQ8BJF9 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC17.45■□□□□ 0.38
Chmp2bQ8BJF9 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Chmp2bQ8BJF9 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
Chmp2bQ8BJF9 Gm42918-201ENSMUST00000199249 1580 ntBASIC17.45■□□□□ 0.38
Chmp2bQ8BJF9 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Chmp2bQ8BJF9 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Chmp2bQ8BJF9 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Chmp2bQ8BJF9 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Chmp2bQ8BJF9 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Chmp2bQ8BJF9 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Chmp2bQ8BJF9 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Chmp2bQ8BJF9 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
Chmp2bQ8BJF9 Haglr-201ENSMUST00000100000 2085 ntBASIC17.45■□□□□ 0.38
Chmp2bQ8BJF9 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC17.45■□□□□ 0.38
Chmp2bQ8BJF9 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Chmp2bQ8BJF9 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC17.45■□□□□ 0.38
Chmp2bQ8BJF9 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC17.45■□□□□ 0.38
Chmp2bQ8BJF9 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Chmp2bQ8BJF9 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC17.45■□□□□ 0.38
Chmp2bQ8BJF9 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Chmp2bQ8BJF9 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC17.45■□□□□ 0.38
Chmp2bQ8BJF9 Gm21596-201ENSMUST00000178049 1316 ntBASIC17.45■□□□□ 0.38
Chmp2bQ8BJF9 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
Chmp2bQ8BJF9 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
Chmp2bQ8BJF9 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
Chmp2bQ8BJF9 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Chmp2bQ8BJF9 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
Chmp2bQ8BJF9 Gm26917-202ENSMUST00000192833 3329 ntBASIC17.44■□□□□ 0.38
Chmp2bQ8BJF9 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Chmp2bQ8BJF9 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Chmp2bQ8BJF9 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Chmp2bQ8BJF9 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Chmp2bQ8BJF9 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Chmp2bQ8BJF9 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
Chmp2bQ8BJF9 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC17.44■□□□□ 0.38
Chmp2bQ8BJF9 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Chmp2bQ8BJF9 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Chmp2bQ8BJF9 CT010478.1-201ENSMUST00000220747 2787 ntBASIC17.44■□□□□ 0.38
Chmp2bQ8BJF9 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Chmp2bQ8BJF9 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Chmp2bQ8BJF9 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC17.44■□□□□ 0.38
Chmp2bQ8BJF9 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Chmp2bQ8BJF9 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Chmp2bQ8BJF9 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC17.43■□□□□ 0.38
Chmp2bQ8BJF9 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Chmp2bQ8BJF9 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Chmp2bQ8BJF9 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Chmp2bQ8BJF9 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Chmp2bQ8BJF9 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Chmp2bQ8BJF9 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC17.43■□□□□ 0.38
Chmp2bQ8BJF9 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC17.43■□□□□ 0.38
Chmp2bQ8BJF9 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Chmp2bQ8BJF9 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC17.43■□□□□ 0.38
Chmp2bQ8BJF9 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC17.43■□□□□ 0.38
Chmp2bQ8BJF9 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Chmp2bQ8BJF9 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Chmp2bQ8BJF9 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Chmp2bQ8BJF9 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Chmp2bQ8BJF9 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
Chmp2bQ8BJF9 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC17.43■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 20.8 ms