Protein–RNA interactions for Protein: Q8BI21

Rnf38, E3 ubiquitin-protein ligase RNF38, mousemouse

Predictions only

Length 518 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf38Q8BI21 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Rnf38Q8BI21 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC16.48■□□□□ 0.23
Rnf38Q8BI21 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC16.48■□□□□ 0.23
Rnf38Q8BI21 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Rnf38Q8BI21 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Rnf38Q8BI21 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Rnf38Q8BI21 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
Rnf38Q8BI21 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
Rnf38Q8BI21 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Rnf38Q8BI21 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Rnf38Q8BI21 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Rnf38Q8BI21 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Rnf38Q8BI21 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Rnf38Q8BI21 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC16.48■□□□□ 0.23
Rnf38Q8BI21 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
Rnf38Q8BI21 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Rnf38Q8BI21 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
Rnf38Q8BI21 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Rnf38Q8BI21 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC16.47■□□□□ 0.23
Rnf38Q8BI21 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC16.47■□□□□ 0.23
Rnf38Q8BI21 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Rnf38Q8BI21 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC16.47■□□□□ 0.23
Rnf38Q8BI21 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC16.47■□□□□ 0.23
Rnf38Q8BI21 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC16.47■□□□□ 0.23
Rnf38Q8BI21 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Rnf38Q8BI21 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Rnf38Q8BI21 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
Rnf38Q8BI21 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Rnf38Q8BI21 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Rnf38Q8BI21 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Rnf38Q8BI21 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC16.47■□□□□ 0.23
Rnf38Q8BI21 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Rnf38Q8BI21 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
Rnf38Q8BI21 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Rnf38Q8BI21 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Rnf38Q8BI21 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Rnf38Q8BI21 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Rnf38Q8BI21 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC16.46■□□□□ 0.23
Rnf38Q8BI21 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
Rnf38Q8BI21 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Rnf38Q8BI21 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC16.46■□□□□ 0.23
Rnf38Q8BI21 Gm20049-201ENSMUST00000219950 730 ntBASIC16.46■□□□□ 0.23
Rnf38Q8BI21 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Rnf38Q8BI21 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Rnf38Q8BI21 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
Rnf38Q8BI21 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Rnf38Q8BI21 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Rnf38Q8BI21 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Rnf38Q8BI21 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Rnf38Q8BI21 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Rnf38Q8BI21 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Rnf38Q8BI21 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.22
Rnf38Q8BI21 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.22
Rnf38Q8BI21 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC16.46■□□□□ 0.22
Rnf38Q8BI21 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC16.46■□□□□ 0.22
Rnf38Q8BI21 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC16.46■□□□□ 0.22
Rnf38Q8BI21 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
Rnf38Q8BI21 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.22
Rnf38Q8BI21 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
Rnf38Q8BI21 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
Rnf38Q8BI21 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Rnf38Q8BI21 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Rnf38Q8BI21 Gm8839-201ENSMUST00000121279 1645 ntBASIC16.45■□□□□ 0.22
Rnf38Q8BI21 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Rnf38Q8BI21 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Rnf38Q8BI21 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Rnf38Q8BI21 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC16.45■□□□□ 0.22
Rnf38Q8BI21 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
Rnf38Q8BI21 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Rnf38Q8BI21 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Rnf38Q8BI21 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
Rnf38Q8BI21 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Rnf38Q8BI21 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Rnf38Q8BI21 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Rnf38Q8BI21 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC16.45■□□□□ 0.22
Rnf38Q8BI21 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
Rnf38Q8BI21 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Rnf38Q8BI21 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Rnf38Q8BI21 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
Rnf38Q8BI21 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Rnf38Q8BI21 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC16.44■□□□□ 0.22
Rnf38Q8BI21 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Rnf38Q8BI21 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Rnf38Q8BI21 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Rnf38Q8BI21 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC16.44■□□□□ 0.22
Rnf38Q8BI21 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC16.44■□□□□ 0.22
Rnf38Q8BI21 Gm42545-201ENSMUST00000202755 922 ntBASIC16.44■□□□□ 0.22
Rnf38Q8BI21 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC16.44■□□□□ 0.22
Rnf38Q8BI21 AC166341.7-201ENSMUST00000221698 126 ntBASIC16.44■□□□□ 0.22
Rnf38Q8BI21 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Rnf38Q8BI21 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Rnf38Q8BI21 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC16.44■□□□□ 0.22
Rnf38Q8BI21 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
Rnf38Q8BI21 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
Rnf38Q8BI21 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Rnf38Q8BI21 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Rnf38Q8BI21 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
Rnf38Q8BI21 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Rnf38Q8BI21 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Rnf38Q8BI21 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 34.2 ms