Protein–RNA interactions for Protein: Q8BGE7

Trim6, Tripartite motif-containing protein 6, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim6Q8BGE7 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Trim6Q8BGE7 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Trim6Q8BGE7 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Trim6Q8BGE7 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Trim6Q8BGE7 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
Trim6Q8BGE7 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Trim6Q8BGE7 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
Trim6Q8BGE7 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
Trim6Q8BGE7 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Trim6Q8BGE7 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Trim6Q8BGE7 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Trim6Q8BGE7 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC18.14■□□□□ 0.49
Trim6Q8BGE7 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Trim6Q8BGE7 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC18.14■□□□□ 0.49
Trim6Q8BGE7 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Trim6Q8BGE7 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC18.14■□□□□ 0.49
Trim6Q8BGE7 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trim6Q8BGE7 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Trim6Q8BGE7 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Trim6Q8BGE7 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trim6Q8BGE7 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trim6Q8BGE7 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trim6Q8BGE7 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trim6Q8BGE7 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trim6Q8BGE7 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trim6Q8BGE7 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trim6Q8BGE7 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trim6Q8BGE7 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trim6Q8BGE7 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trim6Q8BGE7 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
Trim6Q8BGE7 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trim6Q8BGE7 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC18.12■□□□□ 0.49
Trim6Q8BGE7 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC18.12■□□□□ 0.49
Trim6Q8BGE7 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
Trim6Q8BGE7 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Trim6Q8BGE7 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Trim6Q8BGE7 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC18.12■□□□□ 0.49
Trim6Q8BGE7 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Trim6Q8BGE7 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
Trim6Q8BGE7 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
Trim6Q8BGE7 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
Trim6Q8BGE7 Gm10849-201ENSMUST00000100397 618 ntBASIC18.12■□□□□ 0.49
Trim6Q8BGE7 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Trim6Q8BGE7 Mir2861-201ENSMUST00000175539 82 ntBASIC18.12■□□□□ 0.49
Trim6Q8BGE7 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Trim6Q8BGE7 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Trim6Q8BGE7 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
Trim6Q8BGE7 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Trim6Q8BGE7 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Trim6Q8BGE7 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Trim6Q8BGE7 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
Trim6Q8BGE7 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Trim6Q8BGE7 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Trim6Q8BGE7 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
Trim6Q8BGE7 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Trim6Q8BGE7 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC18.11■□□□□ 0.49
Trim6Q8BGE7 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC18.11■□□□□ 0.49
Trim6Q8BGE7 Gm26571-201ENSMUST00000181399 666 ntBASIC18.11■□□□□ 0.49
Trim6Q8BGE7 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Trim6Q8BGE7 Gm42569-201ENSMUST00000200539 472 ntBASIC18.11■□□□□ 0.49
Trim6Q8BGE7 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
Trim6Q8BGE7 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Trim6Q8BGE7 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Trim6Q8BGE7 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Trim6Q8BGE7 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Trim6Q8BGE7 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
Trim6Q8BGE7 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC18.11■□□□□ 0.49
Trim6Q8BGE7 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Trim6Q8BGE7 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Trim6Q8BGE7 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Trim6Q8BGE7 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC18.1■□□□□ 0.49
Trim6Q8BGE7 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Trim6Q8BGE7 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Trim6Q8BGE7 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
Trim6Q8BGE7 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Trim6Q8BGE7 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
Trim6Q8BGE7 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Trim6Q8BGE7 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Trim6Q8BGE7 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Trim6Q8BGE7 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Trim6Q8BGE7 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Trim6Q8BGE7 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
Trim6Q8BGE7 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
Trim6Q8BGE7 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC18.1■□□□□ 0.49
Trim6Q8BGE7 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Trim6Q8BGE7 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC18.1■□□□□ 0.49
Trim6Q8BGE7 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC18.1■□□□□ 0.49
Trim6Q8BGE7 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Trim6Q8BGE7 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC18.1■□□□□ 0.49
Trim6Q8BGE7 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Trim6Q8BGE7 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC18.1■□□□□ 0.49
Trim6Q8BGE7 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Trim6Q8BGE7 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
Trim6Q8BGE7 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Trim6Q8BGE7 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Trim6Q8BGE7 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Trim6Q8BGE7 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Trim6Q8BGE7 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
Trim6Q8BGE7 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Trim6Q8BGE7 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 20.8 ms