Protein–RNA interactions for Protein: Q80XG9

Lrrtm4, Leucine-rich repeat transmembrane neuronal protein 4, mousemouse

Predictions only

Length 590 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrrtm4Q80XG9 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Lrrtm4Q80XG9 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Lrrtm4Q80XG9 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Lrrtm4Q80XG9 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC16.62■□□□□ 0.25
Lrrtm4Q80XG9 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Lrrtm4Q80XG9 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Lrrtm4Q80XG9 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Lrrtm4Q80XG9 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Lrrtm4Q80XG9 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
Lrrtm4Q80XG9 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Lrrtm4Q80XG9 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Lrrtm4Q80XG9 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC16.61■□□□□ 0.25
Lrrtm4Q80XG9 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Lrrtm4Q80XG9 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Lrrtm4Q80XG9 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Lrrtm4Q80XG9 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Lrrtm4Q80XG9 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Lrrtm4Q80XG9 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Lrrtm4Q80XG9 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC16.61■□□□□ 0.25
Lrrtm4Q80XG9 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Lrrtm4Q80XG9 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Lrrtm4Q80XG9 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Lrrtm4Q80XG9 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
Lrrtm4Q80XG9 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Lrrtm4Q80XG9 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Lrrtm4Q80XG9 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Lrrtm4Q80XG9 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Lrrtm4Q80XG9 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Lrrtm4Q80XG9 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC16.6■□□□□ 0.25
Lrrtm4Q80XG9 Mir1668-201ENSMUST00000184114 107 ntBASIC16.6■□□□□ 0.25
Lrrtm4Q80XG9 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Lrrtm4Q80XG9 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Lrrtm4Q80XG9 Gm44832-201ENSMUST00000208849 2303 ntBASIC16.6■□□□□ 0.25
Lrrtm4Q80XG9 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Lrrtm4Q80XG9 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Lrrtm4Q80XG9 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Lrrtm4Q80XG9 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Lrrtm4Q80XG9 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC16.6■□□□□ 0.25
Lrrtm4Q80XG9 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Lrrtm4Q80XG9 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Lrrtm4Q80XG9 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Lrrtm4Q80XG9 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Lrrtm4Q80XG9 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Lrrtm4Q80XG9 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Lrrtm4Q80XG9 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Lrrtm4Q80XG9 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Lrrtm4Q80XG9 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Lrrtm4Q80XG9 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
Lrrtm4Q80XG9 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.25
Lrrtm4Q80XG9 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC16.58■□□□□ 0.25
Lrrtm4Q80XG9 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.25
Lrrtm4Q80XG9 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC16.58■□□□□ 0.25
Lrrtm4Q80XG9 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC16.58■□□□□ 0.25
Lrrtm4Q80XG9 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Lrrtm4Q80XG9 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.25
Lrrtm4Q80XG9 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC16.58■□□□□ 0.25
Lrrtm4Q80XG9 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
Lrrtm4Q80XG9 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC16.58■□□□□ 0.24
Lrrtm4Q80XG9 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
Lrrtm4Q80XG9 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC16.58■□□□□ 0.24
Lrrtm4Q80XG9 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC16.58■□□□□ 0.24
Lrrtm4Q80XG9 Gm27000-201ENSMUST00000182943 842 ntBASIC16.58■□□□□ 0.24
Lrrtm4Q80XG9 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Lrrtm4Q80XG9 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Lrrtm4Q80XG9 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Lrrtm4Q80XG9 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
Lrrtm4Q80XG9 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC16.58■□□□□ 0.24
Lrrtm4Q80XG9 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Lrrtm4Q80XG9 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Lrrtm4Q80XG9 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Lrrtm4Q80XG9 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Lrrtm4Q80XG9 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Lrrtm4Q80XG9 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Lrrtm4Q80XG9 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Lrrtm4Q80XG9 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Lrrtm4Q80XG9 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Lrrtm4Q80XG9 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Lrrtm4Q80XG9 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Lrrtm4Q80XG9 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Lrrtm4Q80XG9 AC154855.1-201ENSMUST00000227353 1458 ntBASIC16.57■□□□□ 0.24
Lrrtm4Q80XG9 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
Lrrtm4Q80XG9 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Lrrtm4Q80XG9 Gm27389-201ENSMUST00000183622 195 ntBASIC16.57■□□□□ 0.24
Lrrtm4Q80XG9 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC16.57■□□□□ 0.24
Lrrtm4Q80XG9 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC16.57■□□□□ 0.24
Lrrtm4Q80XG9 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
Lrrtm4Q80XG9 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Lrrtm4Q80XG9 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Lrrtm4Q80XG9 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Lrrtm4Q80XG9 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
Lrrtm4Q80XG9 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Lrrtm4Q80XG9 Gm37519-201ENSMUST00000191687 2210 ntBASIC16.57■□□□□ 0.24
Lrrtm4Q80XG9 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Lrrtm4Q80XG9 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Lrrtm4Q80XG9 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC16.56■□□□□ 0.24
Lrrtm4Q80XG9 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Lrrtm4Q80XG9 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Lrrtm4Q80XG9 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Lrrtm4Q80XG9 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Lrrtm4Q80XG9 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC16.56■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 36.7 ms