Protein–RNA interactions for Protein: Q80XC3

Usp6nl, USP6 N-terminal-like protein, mousemouse

Predictions only

Length 819 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp6nlQ80XC3 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
Usp6nlQ80XC3 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Usp6nlQ80XC3 AC164629.2-201ENSMUST00000217916 270 ntBASIC18.81■□□□□ 0.6
Usp6nlQ80XC3 AC124569.2-201ENSMUST00000225998 818 ntBASIC18.81■□□□□ 0.6
Usp6nlQ80XC3 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Usp6nlQ80XC3 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
Usp6nlQ80XC3 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Usp6nlQ80XC3 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
Usp6nlQ80XC3 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Usp6nlQ80XC3 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Usp6nlQ80XC3 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Usp6nlQ80XC3 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
Usp6nlQ80XC3 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
Usp6nlQ80XC3 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Usp6nlQ80XC3 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Usp6nlQ80XC3 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Usp6nlQ80XC3 AC123834.2-201ENSMUST00000224038 2340 ntBASIC18.8■□□□□ 0.6
Usp6nlQ80XC3 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Usp6nlQ80XC3 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Usp6nlQ80XC3 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Usp6nlQ80XC3 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Usp6nlQ80XC3 Zkscan4-202ENSMUST00000225845 1506 ntBASIC18.8■□□□□ 0.6
Usp6nlQ80XC3 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Usp6nlQ80XC3 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Usp6nlQ80XC3 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Usp6nlQ80XC3 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC18.8■□□□□ 0.6
Usp6nlQ80XC3 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC18.8■□□□□ 0.6
Usp6nlQ80XC3 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Usp6nlQ80XC3 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Usp6nlQ80XC3 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
Usp6nlQ80XC3 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC18.8■□□□□ 0.6
Usp6nlQ80XC3 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
Usp6nlQ80XC3 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Usp6nlQ80XC3 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Usp6nlQ80XC3 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Usp6nlQ80XC3 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Usp6nlQ80XC3 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Usp6nlQ80XC3 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Usp6nlQ80XC3 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Usp6nlQ80XC3 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Usp6nlQ80XC3 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
Usp6nlQ80XC3 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Usp6nlQ80XC3 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
Usp6nlQ80XC3 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC18.79■□□□□ 0.6
Usp6nlQ80XC3 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC18.79■□□□□ 0.6
Usp6nlQ80XC3 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Usp6nlQ80XC3 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
Usp6nlQ80XC3 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC18.79■□□□□ 0.6
Usp6nlQ80XC3 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
Usp6nlQ80XC3 Gm27459-201ENSMUST00000184860 107 ntBASIC18.79■□□□□ 0.6
Usp6nlQ80XC3 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Usp6nlQ80XC3 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Usp6nlQ80XC3 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Usp6nlQ80XC3 Dmtn-210ENSMUST00000228824 2377 ntBASIC18.79■□□□□ 0.6
Usp6nlQ80XC3 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Usp6nlQ80XC3 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Usp6nlQ80XC3 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Usp6nlQ80XC3 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Usp6nlQ80XC3 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Usp6nlQ80XC3 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Usp6nlQ80XC3 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Usp6nlQ80XC3 Gm12895-201ENSMUST00000122214 226 ntBASIC18.78■□□□□ 0.6
Usp6nlQ80XC3 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC18.78■□□□□ 0.6
Usp6nlQ80XC3 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Usp6nlQ80XC3 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Usp6nlQ80XC3 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
Usp6nlQ80XC3 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Usp6nlQ80XC3 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Usp6nlQ80XC3 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC18.77■□□□□ 0.6
Usp6nlQ80XC3 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
Usp6nlQ80XC3 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Usp6nlQ80XC3 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Usp6nlQ80XC3 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC18.77■□□□□ 0.6
Usp6nlQ80XC3 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
Usp6nlQ80XC3 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Usp6nlQ80XC3 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Usp6nlQ80XC3 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC18.77■□□□□ 0.6
Usp6nlQ80XC3 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.59
Usp6nlQ80XC3 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
Usp6nlQ80XC3 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Usp6nlQ80XC3 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Usp6nlQ80XC3 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
Usp6nlQ80XC3 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Usp6nlQ80XC3 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Usp6nlQ80XC3 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Usp6nlQ80XC3 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Usp6nlQ80XC3 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Usp6nlQ80XC3 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Usp6nlQ80XC3 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
Usp6nlQ80XC3 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Usp6nlQ80XC3 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC18.76■□□□□ 0.59
Usp6nlQ80XC3 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Usp6nlQ80XC3 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
Usp6nlQ80XC3 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC18.76■□□□□ 0.59
Usp6nlQ80XC3 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Usp6nlQ80XC3 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC18.76■□□□□ 0.59
Usp6nlQ80XC3 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC18.75■□□□□ 0.59
Usp6nlQ80XC3 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Usp6nlQ80XC3 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC18.75■□□□□ 0.59
Usp6nlQ80XC3 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 114.8 ms