Protein–RNA interactions for Protein: Q80X53

Ccdc116, Coiled-coil domain-containing protein 116, mousemouse

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc116Q80X53 Haglr-201ENSMUST00000100000 2085 ntBASIC16.67■□□□□ 0.26
Ccdc116Q80X53 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Ccdc116Q80X53 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Ccdc116Q80X53 Mir1199-201ENSMUST00000117015 119 ntBASIC16.67■□□□□ 0.26
Ccdc116Q80X53 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC16.67■□□□□ 0.26
Ccdc116Q80X53 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Ccdc116Q80X53 AC153881.1-201ENSMUST00000214448 284 ntBASIC16.67■□□□□ 0.26
Ccdc116Q80X53 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Ccdc116Q80X53 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Ccdc116Q80X53 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
Ccdc116Q80X53 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Ccdc116Q80X53 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Ccdc116Q80X53 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
Ccdc116Q80X53 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Ccdc116Q80X53 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Ccdc116Q80X53 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
Ccdc116Q80X53 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Ccdc116Q80X53 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Ccdc116Q80X53 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Ccdc116Q80X53 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Ccdc116Q80X53 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC16.66■□□□□ 0.26
Ccdc116Q80X53 AL590614.2-201ENSMUST00000225374 1937 ntBASIC16.66■□□□□ 0.26
Ccdc116Q80X53 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ccdc116Q80X53 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ccdc116Q80X53 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
Ccdc116Q80X53 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC16.66■□□□□ 0.26
Ccdc116Q80X53 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
Ccdc116Q80X53 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC16.66■□□□□ 0.26
Ccdc116Q80X53 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ccdc116Q80X53 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ccdc116Q80X53 Gm13216-201ENSMUST00000117145 591 ntBASIC16.66■□□□□ 0.26
Ccdc116Q80X53 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Ccdc116Q80X53 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC16.66■□□□□ 0.26
Ccdc116Q80X53 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
Ccdc116Q80X53 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Ccdc116Q80X53 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
Ccdc116Q80X53 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ccdc116Q80X53 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC16.66■□□□□ 0.26
Ccdc116Q80X53 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
Ccdc116Q80X53 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ccdc116Q80X53 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ccdc116Q80X53 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC16.66■□□□□ 0.26
Ccdc116Q80X53 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
Ccdc116Q80X53 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ccdc116Q80X53 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
Ccdc116Q80X53 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ccdc116Q80X53 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ccdc116Q80X53 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ccdc116Q80X53 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ccdc116Q80X53 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ccdc116Q80X53 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ccdc116Q80X53 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ccdc116Q80X53 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Ccdc116Q80X53 Gm15743-202ENSMUST00000182690 1901 ntBASIC16.65■□□□□ 0.26
Ccdc116Q80X53 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ccdc116Q80X53 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC16.65■□□□□ 0.26
Ccdc116Q80X53 Gm37025-201ENSMUST00000195159 829 ntBASIC16.65■□□□□ 0.26
Ccdc116Q80X53 Gm16042-201ENSMUST00000204813 1247 ntBASIC16.65■□□□□ 0.26
Ccdc116Q80X53 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ccdc116Q80X53 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Ccdc116Q80X53 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ccdc116Q80X53 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ccdc116Q80X53 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ccdc116Q80X53 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Ccdc116Q80X53 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ccdc116Q80X53 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Ccdc116Q80X53 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ccdc116Q80X53 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ccdc116Q80X53 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ccdc116Q80X53 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ccdc116Q80X53 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ccdc116Q80X53 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ccdc116Q80X53 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ccdc116Q80X53 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC16.64■□□□□ 0.25
Ccdc116Q80X53 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ccdc116Q80X53 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Ccdc116Q80X53 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ccdc116Q80X53 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ccdc116Q80X53 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ccdc116Q80X53 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ccdc116Q80X53 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ccdc116Q80X53 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ccdc116Q80X53 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
Ccdc116Q80X53 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ccdc116Q80X53 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC16.64■□□□□ 0.25
Ccdc116Q80X53 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ccdc116Q80X53 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ccdc116Q80X53 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ccdc116Q80X53 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ccdc116Q80X53 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
Ccdc116Q80X53 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ccdc116Q80X53 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC16.63■□□□□ 0.25
Ccdc116Q80X53 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ccdc116Q80X53 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ccdc116Q80X53 Cxcl14-202ENSMUST00000224801 1467 ntBASIC16.63■□□□□ 0.25
Ccdc116Q80X53 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ccdc116Q80X53 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ccdc116Q80X53 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Ccdc116Q80X53 Gm27011-201ENSMUST00000182352 972 ntBASIC16.63■□□□□ 0.25
Ccdc116Q80X53 Gm38027-201ENSMUST00000192315 235 ntBASIC16.63■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 23.7 ms