Protein–RNA interactions for Protein: Q80VA5

Sh3tc2, SH3 domain and tetratricopeptide repeat-containing protein 2, mousemouse

Predictions only

Length 1,289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3tc2Q80VA5 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Sh3tc2Q80VA5 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Sh3tc2Q80VA5 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Sh3tc2Q80VA5 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC18.55■□□□□ 0.56
Sh3tc2Q80VA5 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Sh3tc2Q80VA5 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Sh3tc2Q80VA5 Gm6623-201ENSMUST00000173570 544 ntBASIC18.55■□□□□ 0.56
Sh3tc2Q80VA5 Gm27357-201ENSMUST00000183754 135 ntBASIC18.55■□□□□ 0.56
Sh3tc2Q80VA5 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Sh3tc2Q80VA5 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Sh3tc2Q80VA5 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Sh3tc2Q80VA5 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC18.55■□□□□ 0.56
Sh3tc2Q80VA5 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Sh3tc2Q80VA5 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Sh3tc2Q80VA5 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Sh3tc2Q80VA5 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Sh3tc2Q80VA5 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Sh3tc2Q80VA5 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Sh3tc2Q80VA5 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
Sh3tc2Q80VA5 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Sh3tc2Q80VA5 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Sh3tc2Q80VA5 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC18.54■□□□□ 0.56
Sh3tc2Q80VA5 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Sh3tc2Q80VA5 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Sh3tc2Q80VA5 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Sh3tc2Q80VA5 Gm37025-201ENSMUST00000195159 829 ntBASIC18.54■□□□□ 0.56
Sh3tc2Q80VA5 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Sh3tc2Q80VA5 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Sh3tc2Q80VA5 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Sh3tc2Q80VA5 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Sh3tc2Q80VA5 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
Sh3tc2Q80VA5 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Sh3tc2Q80VA5 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Sh3tc2Q80VA5 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Sh3tc2Q80VA5 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Sh3tc2Q80VA5 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC18.53■□□□□ 0.56
Sh3tc2Q80VA5 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Sh3tc2Q80VA5 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Sh3tc2Q80VA5 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Sh3tc2Q80VA5 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Sh3tc2Q80VA5 Gm27742-201ENSMUST00000184667 60 ntBASIC18.53■□□□□ 0.56
Sh3tc2Q80VA5 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
Sh3tc2Q80VA5 Gm29791-202ENSMUST00000207888 369 ntBASIC18.53■□□□□ 0.56
Sh3tc2Q80VA5 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Sh3tc2Q80VA5 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Sh3tc2Q80VA5 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Sh3tc2Q80VA5 Spr-ps1-201ENSMUST00000089584 605 ntBASIC18.53■□□□□ 0.56
Sh3tc2Q80VA5 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Sh3tc2Q80VA5 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Sh3tc2Q80VA5 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Sh3tc2Q80VA5 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Sh3tc2Q80VA5 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Sh3tc2Q80VA5 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Sh3tc2Q80VA5 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Sh3tc2Q80VA5 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC18.52■□□□□ 0.56
Sh3tc2Q80VA5 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Sh3tc2Q80VA5 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Sh3tc2Q80VA5 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC18.52■□□□□ 0.56
Sh3tc2Q80VA5 9130024F11Rik-201ENSMUST00000135238 1300 ntTSL 2 BASIC18.52■□□□□ 0.56
Sh3tc2Q80VA5 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Sh3tc2Q80VA5 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Sh3tc2Q80VA5 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
Sh3tc2Q80VA5 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC18.52■□□□□ 0.56
Sh3tc2Q80VA5 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
Sh3tc2Q80VA5 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC18.52■□□□□ 0.56
Sh3tc2Q80VA5 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Sh3tc2Q80VA5 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Sh3tc2Q80VA5 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Sh3tc2Q80VA5 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Sh3tc2Q80VA5 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Sh3tc2Q80VA5 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC18.52■□□□□ 0.56
Sh3tc2Q80VA5 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Sh3tc2Q80VA5 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Sh3tc2Q80VA5 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Sh3tc2Q80VA5 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Sh3tc2Q80VA5 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Sh3tc2Q80VA5 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Sh3tc2Q80VA5 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC18.51■□□□□ 0.55
Sh3tc2Q80VA5 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC18.51■□□□□ 0.55
Sh3tc2Q80VA5 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Sh3tc2Q80VA5 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Sh3tc2Q80VA5 Mir770-201ENSMUST00000103252 94 ntBASIC18.51■□□□□ 0.55
Sh3tc2Q80VA5 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC18.51■□□□□ 0.55
Sh3tc2Q80VA5 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Sh3tc2Q80VA5 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC18.51■□□□□ 0.55
Sh3tc2Q80VA5 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
Sh3tc2Q80VA5 Gm18115-201ENSMUST00000221209 621 ntBASIC18.51■□□□□ 0.55
Sh3tc2Q80VA5 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Sh3tc2Q80VA5 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Sh3tc2Q80VA5 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Sh3tc2Q80VA5 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Sh3tc2Q80VA5 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC18.5■□□□□ 0.55
Sh3tc2Q80VA5 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Sh3tc2Q80VA5 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
Sh3tc2Q80VA5 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Sh3tc2Q80VA5 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Sh3tc2Q80VA5 Gm11860-201ENSMUST00000122346 1010 ntBASIC18.5■□□□□ 0.55
Sh3tc2Q80VA5 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
Sh3tc2Q80VA5 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC18.5■□□□□ 0.55
Sh3tc2Q80VA5 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 31.7 ms