Protein–RNA interactions for Protein: Q80V85

Trim62, E3 ubiquitin-protein ligase TRIM62, mousemouse

Predictions only

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim62Q80V85 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC17.66■□□□□ 0.42
Trim62Q80V85 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trim62Q80V85 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trim62Q80V85 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trim62Q80V85 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC17.66■□□□□ 0.42
Trim62Q80V85 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trim62Q80V85 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Trim62Q80V85 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trim62Q80V85 Rarb-207ENSMUST00000225921 2756 ntBASIC17.65■□□□□ 0.42
Trim62Q80V85 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trim62Q80V85 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
Trim62Q80V85 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
Trim62Q80V85 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
Trim62Q80V85 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC17.65■□□□□ 0.42
Trim62Q80V85 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Trim62Q80V85 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
Trim62Q80V85 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trim62Q80V85 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
Trim62Q80V85 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
Trim62Q80V85 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
Trim62Q80V85 AC134329.2-201ENSMUST00000217897 428 ntBASIC17.65■□□□□ 0.42
Trim62Q80V85 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trim62Q80V85 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
Trim62Q80V85 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC17.65■□□□□ 0.42
Trim62Q80V85 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC17.65■□□□□ 0.42
Trim62Q80V85 Spsb2-203ENSMUST00000112473 1322 ntBASIC17.65■□□□□ 0.42
Trim62Q80V85 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trim62Q80V85 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Trim62Q80V85 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
Trim62Q80V85 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trim62Q80V85 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.42
Trim62Q80V85 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Trim62Q80V85 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.42
Trim62Q80V85 Gm37519-201ENSMUST00000191687 2210 ntBASIC17.64■□□□□ 0.42
Trim62Q80V85 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.42
Trim62Q80V85 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trim62Q80V85 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trim62Q80V85 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trim62Q80V85 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Trim62Q80V85 Tfap2a-209ENSMUST00000225180 1828 ntBASIC17.64■□□□□ 0.41
Trim62Q80V85 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trim62Q80V85 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trim62Q80V85 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC17.64■□□□□ 0.41
Trim62Q80V85 Gm13836-201ENSMUST00000121159 501 ntBASIC17.64■□□□□ 0.41
Trim62Q80V85 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
Trim62Q80V85 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC17.64■□□□□ 0.41
Trim62Q80V85 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Trim62Q80V85 Gm27000-201ENSMUST00000182943 842 ntBASIC17.64■□□□□ 0.41
Trim62Q80V85 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
Trim62Q80V85 Gm7370-201ENSMUST00000219471 767 ntBASIC17.64■□□□□ 0.41
Trim62Q80V85 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Trim62Q80V85 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trim62Q80V85 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC17.64■□□□□ 0.41
Trim62Q80V85 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
Trim62Q80V85 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trim62Q80V85 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trim62Q80V85 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trim62Q80V85 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trim62Q80V85 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
Trim62Q80V85 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
Trim62Q80V85 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trim62Q80V85 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trim62Q80V85 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trim62Q80V85 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trim62Q80V85 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Trim62Q80V85 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Trim62Q80V85 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Trim62Q80V85 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trim62Q80V85 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trim62Q80V85 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trim62Q80V85 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trim62Q80V85 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC17.63■□□□□ 0.41
Trim62Q80V85 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Trim62Q80V85 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trim62Q80V85 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Trim62Q80V85 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trim62Q80V85 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
Trim62Q80V85 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trim62Q80V85 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Trim62Q80V85 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Trim62Q80V85 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Trim62Q80V85 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC17.63■□□□□ 0.41
Trim62Q80V85 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC17.63■□□□□ 0.41
Trim62Q80V85 AC154855.1-201ENSMUST00000227353 1458 ntBASIC17.63■□□□□ 0.41
Trim62Q80V85 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trim62Q80V85 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Trim62Q80V85 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Trim62Q80V85 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trim62Q80V85 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trim62Q80V85 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trim62Q80V85 Mir1668-201ENSMUST00000184114 107 ntBASIC17.62■□□□□ 0.41
Trim62Q80V85 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Trim62Q80V85 AC121577.1-201ENSMUST00000227302 707 ntBASIC17.62■□□□□ 0.41
Trim62Q80V85 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trim62Q80V85 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trim62Q80V85 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trim62Q80V85 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Trim62Q80V85 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trim62Q80V85 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trim62Q80V85 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 83.5 ms