Protein–RNA interactions for Protein: Q80UU2

Rpp38, Ribonuclease P protein subunit p38, mousemouse

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpp38Q80UU2 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Rpp38Q80UU2 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Rpp38Q80UU2 AC154855.1-201ENSMUST00000227353 1458 ntBASIC17.03■□□□□ 0.32
Rpp38Q80UU2 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Rpp38Q80UU2 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Rpp38Q80UU2 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC17.03■□□□□ 0.32
Rpp38Q80UU2 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
Rpp38Q80UU2 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Rpp38Q80UU2 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Rpp38Q80UU2 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC17.02■□□□□ 0.32
Rpp38Q80UU2 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Rpp38Q80UU2 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Rpp38Q80UU2 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Rpp38Q80UU2 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Rpp38Q80UU2 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC17.02■□□□□ 0.32
Rpp38Q80UU2 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.31
Rpp38Q80UU2 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Rpp38Q80UU2 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.31
Rpp38Q80UU2 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
Rpp38Q80UU2 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC17.02■□□□□ 0.31
Rpp38Q80UU2 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Rpp38Q80UU2 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
Rpp38Q80UU2 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
Rpp38Q80UU2 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
Rpp38Q80UU2 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC17.01■□□□□ 0.31
Rpp38Q80UU2 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
Rpp38Q80UU2 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Rpp38Q80UU2 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC17.01■□□□□ 0.31
Rpp38Q80UU2 Gm11539-201ENSMUST00000119837 557 ntBASIC17.01■□□□□ 0.31
Rpp38Q80UU2 Gm13436-201ENSMUST00000120418 567 ntBASIC17.01■□□□□ 0.31
Rpp38Q80UU2 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Rpp38Q80UU2 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC17.01■□□□□ 0.31
Rpp38Q80UU2 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Rpp38Q80UU2 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Rpp38Q80UU2 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Rpp38Q80UU2 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Rpp38Q80UU2 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Rpp38Q80UU2 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Rpp38Q80UU2 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Rpp38Q80UU2 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
Rpp38Q80UU2 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
Rpp38Q80UU2 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC17.01■□□□□ 0.31
Rpp38Q80UU2 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
Rpp38Q80UU2 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
Rpp38Q80UU2 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Rpp38Q80UU2 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC17■□□□□ 0.31
Rpp38Q80UU2 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Rpp38Q80UU2 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC17■□□□□ 0.31
Rpp38Q80UU2 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
Rpp38Q80UU2 Gm13559-201ENSMUST00000120476 863 ntBASIC17■□□□□ 0.31
Rpp38Q80UU2 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
Rpp38Q80UU2 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC17■□□□□ 0.31
Rpp38Q80UU2 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC17■□□□□ 0.31
Rpp38Q80UU2 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Rpp38Q80UU2 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Rpp38Q80UU2 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Rpp38Q80UU2 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC17■□□□□ 0.31
Rpp38Q80UU2 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
Rpp38Q80UU2 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC17■□□□□ 0.31
Rpp38Q80UU2 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
Rpp38Q80UU2 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Rpp38Q80UU2 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Rpp38Q80UU2 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Rpp38Q80UU2 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Rpp38Q80UU2 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Rpp38Q80UU2 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC16.99■□□□□ 0.31
Rpp38Q80UU2 Gm2274-201ENSMUST00000184539 609 ntBASIC16.99■□□□□ 0.31
Rpp38Q80UU2 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC16.99■□□□□ 0.31
Rpp38Q80UU2 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
Rpp38Q80UU2 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Rpp38Q80UU2 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Rpp38Q80UU2 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Rpp38Q80UU2 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Rpp38Q80UU2 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Rpp38Q80UU2 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Rpp38Q80UU2 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Rpp38Q80UU2 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Rpp38Q80UU2 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
Rpp38Q80UU2 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC16.98■□□□□ 0.31
Rpp38Q80UU2 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Rpp38Q80UU2 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Rpp38Q80UU2 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Rpp38Q80UU2 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC16.98■□□□□ 0.31
Rpp38Q80UU2 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC16.98■□□□□ 0.31
Rpp38Q80UU2 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC16.98■□□□□ 0.31
Rpp38Q80UU2 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Rpp38Q80UU2 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
Rpp38Q80UU2 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Rpp38Q80UU2 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Rpp38Q80UU2 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Rpp38Q80UU2 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Rpp38Q80UU2 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC16.98■□□□□ 0.31
Rpp38Q80UU2 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Rpp38Q80UU2 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
Rpp38Q80UU2 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC16.97■□□□□ 0.31
Rpp38Q80UU2 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Rpp38Q80UU2 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Rpp38Q80UU2 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Rpp38Q80UU2 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Rpp38Q80UU2 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 54.4 ms