Protein–RNA interactions for Protein: Q80U87

Usp8, Ubiquitin carboxyl-terminal hydrolase 8, mousemouse

Predictions only

Length 1,080 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp8Q80U87 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Usp8Q80U87 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Usp8Q80U87 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Usp8Q80U87 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Usp8Q80U87 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Usp8Q80U87 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC17.12■□□□□ 0.33
Usp8Q80U87 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Usp8Q80U87 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
Usp8Q80U87 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
Usp8Q80U87 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC17.12■□□□□ 0.33
Usp8Q80U87 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Usp8Q80U87 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Usp8Q80U87 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Usp8Q80U87 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Usp8Q80U87 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Usp8Q80U87 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Usp8Q80U87 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Usp8Q80U87 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Usp8Q80U87 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Usp8Q80U87 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC17.11■□□□□ 0.33
Usp8Q80U87 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Usp8Q80U87 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Usp8Q80U87 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Usp8Q80U87 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Usp8Q80U87 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Usp8Q80U87 Gm12441-201ENSMUST00000121806 588 ntBASIC17.11■□□□□ 0.33
Usp8Q80U87 Gm13158-201ENSMUST00000122007 736 ntBASIC17.11■□□□□ 0.33
Usp8Q80U87 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC17.11■□□□□ 0.33
Usp8Q80U87 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC17.11■□□□□ 0.33
Usp8Q80U87 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Usp8Q80U87 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Usp8Q80U87 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Usp8Q80U87 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Usp8Q80U87 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Usp8Q80U87 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Usp8Q80U87 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Usp8Q80U87 Gm45774-201ENSMUST00000211992 2665 ntBASIC17.11■□□□□ 0.33
Usp8Q80U87 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Usp8Q80U87 Gm43272-201ENSMUST00000200599 1584 ntBASIC17.11■□□□□ 0.33
Usp8Q80U87 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Usp8Q80U87 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Usp8Q80U87 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Usp8Q80U87 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC17.1■□□□□ 0.33
Usp8Q80U87 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Usp8Q80U87 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Usp8Q80U87 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC17.1■□□□□ 0.33
Usp8Q80U87 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
Usp8Q80U87 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC17.1■□□□□ 0.33
Usp8Q80U87 Gm37519-201ENSMUST00000191687 2210 ntBASIC17.1■□□□□ 0.33
Usp8Q80U87 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC17.1■□□□□ 0.33
Usp8Q80U87 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC17.1■□□□□ 0.33
Usp8Q80U87 Gm45560-201ENSMUST00000211492 1472 ntBASIC17.1■□□□□ 0.33
Usp8Q80U87 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Usp8Q80U87 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Usp8Q80U87 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Usp8Q80U87 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Usp8Q80U87 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Usp8Q80U87 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Usp8Q80U87 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Usp8Q80U87 Gm43808-201ENSMUST00000202534 2065 ntBASIC17.09■□□□□ 0.33
Usp8Q80U87 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Usp8Q80U87 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Usp8Q80U87 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Usp8Q80U87 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC17.09■□□□□ 0.33
Usp8Q80U87 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
Usp8Q80U87 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Usp8Q80U87 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Usp8Q80U87 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Usp8Q80U87 Gm27275-201ENSMUST00000184318 272 ntBASIC17.09■□□□□ 0.33
Usp8Q80U87 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Usp8Q80U87 Gm20049-201ENSMUST00000219950 730 ntBASIC17.09■□□□□ 0.33
Usp8Q80U87 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Usp8Q80U87 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC17.09■□□□□ 0.33
Usp8Q80U87 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Usp8Q80U87 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Usp8Q80U87 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Usp8Q80U87 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Usp8Q80U87 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Usp8Q80U87 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Usp8Q80U87 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Usp8Q80U87 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Usp8Q80U87 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Usp8Q80U87 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC17.08■□□□□ 0.33
Usp8Q80U87 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.33
Usp8Q80U87 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Usp8Q80U87 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Usp8Q80U87 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Usp8Q80U87 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Usp8Q80U87 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC17.08■□□□□ 0.32
Usp8Q80U87 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Usp8Q80U87 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Usp8Q80U87 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC17.08■□□□□ 0.32
Usp8Q80U87 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Usp8Q80U87 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Usp8Q80U87 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC17.08■□□□□ 0.32
Usp8Q80U87 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
Usp8Q80U87 Tead1-201ENSMUST00000059768 9964 ntAPPRIS P4 TSL 1 (best) BASIC17.08■□□□□ 0.32
Usp8Q80U87 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Usp8Q80U87 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Usp8Q80U87 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 139.7 ms