Protein–RNA interactions for Protein: Q7TSG2

Ctdp1, RNA polymerase II subunit A C-terminal domain phosphatase, mousemouse

Predictions only

Length 960 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ctdp1Q7TSG2 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ctdp1Q7TSG2 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ctdp1Q7TSG2 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ctdp1Q7TSG2 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ctdp1Q7TSG2 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ctdp1Q7TSG2 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ctdp1Q7TSG2 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
Ctdp1Q7TSG2 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ctdp1Q7TSG2 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ctdp1Q7TSG2 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Ctdp1Q7TSG2 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ctdp1Q7TSG2 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ctdp1Q7TSG2 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ctdp1Q7TSG2 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
Ctdp1Q7TSG2 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC18.62■□□□□ 0.57
Ctdp1Q7TSG2 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC18.62■□□□□ 0.57
Ctdp1Q7TSG2 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC18.62■□□□□ 0.57
Ctdp1Q7TSG2 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Ctdp1Q7TSG2 Gm20760-201ENSMUST00000179197 648 ntBASIC18.62■□□□□ 0.57
Ctdp1Q7TSG2 Gm38285-201ENSMUST00000192928 922 ntBASIC18.62■□□□□ 0.57
Ctdp1Q7TSG2 Gm44672-201ENSMUST00000206944 1098 ntBASIC18.62■□□□□ 0.57
Ctdp1Q7TSG2 Gm20049-201ENSMUST00000219950 730 ntBASIC18.62■□□□□ 0.57
Ctdp1Q7TSG2 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ctdp1Q7TSG2 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Ctdp1Q7TSG2 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
Ctdp1Q7TSG2 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Ctdp1Q7TSG2 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ctdp1Q7TSG2 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Ctdp1Q7TSG2 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Ctdp1Q7TSG2 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC18.62■□□□□ 0.57
Ctdp1Q7TSG2 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ctdp1Q7TSG2 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ctdp1Q7TSG2 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC18.62■□□□□ 0.57
Ctdp1Q7TSG2 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ctdp1Q7TSG2 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC18.61■□□□□ 0.57
Ctdp1Q7TSG2 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Ctdp1Q7TSG2 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ctdp1Q7TSG2 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ctdp1Q7TSG2 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
Ctdp1Q7TSG2 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
Ctdp1Q7TSG2 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Ctdp1Q7TSG2 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ctdp1Q7TSG2 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ctdp1Q7TSG2 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ctdp1Q7TSG2 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Ctdp1Q7TSG2 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Ctdp1Q7TSG2 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ctdp1Q7TSG2 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Ctdp1Q7TSG2 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC18.6■□□□□ 0.57
Ctdp1Q7TSG2 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Ctdp1Q7TSG2 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC18.6■□□□□ 0.57
Ctdp1Q7TSG2 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Ctdp1Q7TSG2 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Ctdp1Q7TSG2 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
Ctdp1Q7TSG2 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Ctdp1Q7TSG2 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC18.6■□□□□ 0.57
Ctdp1Q7TSG2 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Ctdp1Q7TSG2 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Ctdp1Q7TSG2 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC18.6■□□□□ 0.57
Ctdp1Q7TSG2 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC18.6■□□□□ 0.57
Ctdp1Q7TSG2 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC18.6■□□□□ 0.57
Ctdp1Q7TSG2 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Ctdp1Q7TSG2 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Ctdp1Q7TSG2 Gm11841-201ENSMUST00000117060 1963 ntBASIC18.6■□□□□ 0.57
Ctdp1Q7TSG2 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
Ctdp1Q7TSG2 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
Ctdp1Q7TSG2 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Ctdp1Q7TSG2 Gm43272-201ENSMUST00000200599 1584 ntBASIC18.59■□□□□ 0.57
Ctdp1Q7TSG2 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Ctdp1Q7TSG2 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Ctdp1Q7TSG2 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Ctdp1Q7TSG2 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC18.59■□□□□ 0.57
Ctdp1Q7TSG2 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Ctdp1Q7TSG2 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
Ctdp1Q7TSG2 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Ctdp1Q7TSG2 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
Ctdp1Q7TSG2 Gm12527-201ENSMUST00000117967 564 ntBASIC18.59■□□□□ 0.57
Ctdp1Q7TSG2 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC18.59■□□□□ 0.57
Ctdp1Q7TSG2 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Ctdp1Q7TSG2 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
Ctdp1Q7TSG2 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
Ctdp1Q7TSG2 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Ctdp1Q7TSG2 Gm37166-201ENSMUST00000195473 2474 ntBASIC18.59■□□□□ 0.57
Ctdp1Q7TSG2 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Ctdp1Q7TSG2 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC18.58■□□□□ 0.57
Ctdp1Q7TSG2 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
Ctdp1Q7TSG2 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC18.58■□□□□ 0.57
Ctdp1Q7TSG2 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC18.58■□□□□ 0.57
Ctdp1Q7TSG2 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.57
Ctdp1Q7TSG2 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Ctdp1Q7TSG2 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.57
Ctdp1Q7TSG2 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Ctdp1Q7TSG2 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
Ctdp1Q7TSG2 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Ctdp1Q7TSG2 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Ctdp1Q7TSG2 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
Ctdp1Q7TSG2 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Ctdp1Q7TSG2 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC18.58■□□□□ 0.56
Ctdp1Q7TSG2 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC18.58■□□□□ 0.56
Ctdp1Q7TSG2 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 23.7 ms