Protein–RNA interactions for Protein: Q7TNH6

Nphp3, Nephrocystin-3, mousemouse

Predictions only

Length 1,325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nphp3Q7TNH6 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
Nphp3Q7TNH6 Actl10-202ENSMUST00000226583 1501 ntBASIC20.72■□□□□ 0.91
Nphp3Q7TNH6 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC20.72■□□□□ 0.91
Nphp3Q7TNH6 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Nphp3Q7TNH6 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Nphp3Q7TNH6 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Nphp3Q7TNH6 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Nphp3Q7TNH6 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Nphp3Q7TNH6 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
Nphp3Q7TNH6 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC20.71■□□□□ 0.91
Nphp3Q7TNH6 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Nphp3Q7TNH6 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Nphp3Q7TNH6 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
Nphp3Q7TNH6 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
Nphp3Q7TNH6 Gm18958-201ENSMUST00000174258 762 ntBASIC20.71■□□□□ 0.91
Nphp3Q7TNH6 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC20.71■□□□□ 0.91
Nphp3Q7TNH6 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Nphp3Q7TNH6 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Nphp3Q7TNH6 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
Nphp3Q7TNH6 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.91
Nphp3Q7TNH6 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC20.7■□□□□ 0.9
Nphp3Q7TNH6 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Nphp3Q7TNH6 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Nphp3Q7TNH6 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC20.7■□□□□ 0.9
Nphp3Q7TNH6 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
Nphp3Q7TNH6 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Nphp3Q7TNH6 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
Nphp3Q7TNH6 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Nphp3Q7TNH6 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Nphp3Q7TNH6 Gm21559-201ENSMUST00000220638 855 ntBASIC20.7■□□□□ 0.9
Nphp3Q7TNH6 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Nphp3Q7TNH6 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Nphp3Q7TNH6 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Nphp3Q7TNH6 Gm8587-201ENSMUST00000076538 843 ntBASIC20.7■□□□□ 0.9
Nphp3Q7TNH6 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Nphp3Q7TNH6 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Nphp3Q7TNH6 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Nphp3Q7TNH6 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Nphp3Q7TNH6 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Nphp3Q7TNH6 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Nphp3Q7TNH6 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Nphp3Q7TNH6 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Nphp3Q7TNH6 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Nphp3Q7TNH6 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Nphp3Q7TNH6 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Nphp3Q7TNH6 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Nphp3Q7TNH6 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Nphp3Q7TNH6 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Nphp3Q7TNH6 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Nphp3Q7TNH6 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC20.68■□□□□ 0.9
Nphp3Q7TNH6 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Nphp3Q7TNH6 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC20.68■□□□□ 0.9
Nphp3Q7TNH6 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
Nphp3Q7TNH6 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
Nphp3Q7TNH6 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Nphp3Q7TNH6 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Nphp3Q7TNH6 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC20.68■□□□□ 0.9
Nphp3Q7TNH6 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Nphp3Q7TNH6 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Nphp3Q7TNH6 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Nphp3Q7TNH6 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Nphp3Q7TNH6 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Nphp3Q7TNH6 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Nphp3Q7TNH6 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Nphp3Q7TNH6 Gm43338-201ENSMUST00000198617 2223 ntBASIC20.67■□□□□ 0.9
Nphp3Q7TNH6 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Nphp3Q7TNH6 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC20.67■□□□□ 0.9
Nphp3Q7TNH6 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Nphp3Q7TNH6 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Nphp3Q7TNH6 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Nphp3Q7TNH6 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Nphp3Q7TNH6 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Nphp3Q7TNH6 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC20.67■□□□□ 0.9
Nphp3Q7TNH6 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Nphp3Q7TNH6 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Nphp3Q7TNH6 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Nphp3Q7TNH6 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Nphp3Q7TNH6 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Nphp3Q7TNH6 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Nphp3Q7TNH6 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Nphp3Q7TNH6 Gm43294-201ENSMUST00000202850 2490 ntBASIC20.67■□□□□ 0.9
Nphp3Q7TNH6 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Nphp3Q7TNH6 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC20.66■□□□□ 0.9
Nphp3Q7TNH6 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Nphp3Q7TNH6 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Nphp3Q7TNH6 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
Nphp3Q7TNH6 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
Nphp3Q7TNH6 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Nphp3Q7TNH6 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Nphp3Q7TNH6 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC20.66■□□□□ 0.9
Nphp3Q7TNH6 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Nphp3Q7TNH6 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Nphp3Q7TNH6 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Nphp3Q7TNH6 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Nphp3Q7TNH6 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Nphp3Q7TNH6 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Nphp3Q7TNH6 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
Nphp3Q7TNH6 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC20.65■□□□□ 0.9
Nphp3Q7TNH6 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Nphp3Q7TNH6 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 21.5 ms