Protein–RNA interactions for Protein: Q70E20

Sned1, Sushi, nidogen and EGF-like domain-containing protein 1, mousemouse

Predictions only

Length 1,403 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sned1Q70E20 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Sned1Q70E20 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
Sned1Q70E20 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC20.65■□□□□ 0.9
Sned1Q70E20 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
Sned1Q70E20 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
Sned1Q70E20 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Sned1Q70E20 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Sned1Q70E20 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Sned1Q70E20 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.9
Sned1Q70E20 Gssos1-201ENSMUST00000142509 716 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Sned1Q70E20 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC20.64■□□□□ 0.89
Sned1Q70E20 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Sned1Q70E20 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Sned1Q70E20 AV026068-213ENSMUST00000223675 1171 ntBASIC20.64■□□□□ 0.89
Sned1Q70E20 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Sned1Q70E20 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Sned1Q70E20 Gm35558-201ENSMUST00000222675 2219 ntBASIC20.64■□□□□ 0.89
Sned1Q70E20 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
Sned1Q70E20 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Sned1Q70E20 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC20.63■□□□□ 0.89
Sned1Q70E20 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC20.63■□□□□ 0.89
Sned1Q70E20 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Sned1Q70E20 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Sned1Q70E20 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Sned1Q70E20 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Sned1Q70E20 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Sned1Q70E20 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC20.63■□□□□ 0.89
Sned1Q70E20 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Sned1Q70E20 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Sned1Q70E20 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Sned1Q70E20 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Sned1Q70E20 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Sned1Q70E20 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Sned1Q70E20 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Sned1Q70E20 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Sned1Q70E20 Gm25745-201ENSMUST00000174945 133 ntBASIC20.62■□□□□ 0.89
Sned1Q70E20 Gm6550-201ENSMUST00000187574 993 ntBASIC20.62■□□□□ 0.89
Sned1Q70E20 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Sned1Q70E20 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Sned1Q70E20 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Sned1Q70E20 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Sned1Q70E20 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
Sned1Q70E20 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
Sned1Q70E20 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
Sned1Q70E20 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Sned1Q70E20 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
Sned1Q70E20 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Sned1Q70E20 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Sned1Q70E20 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC20.62■□□□□ 0.89
Sned1Q70E20 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Sned1Q70E20 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
Sned1Q70E20 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Sned1Q70E20 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Sned1Q70E20 Gm7506-201ENSMUST00000207758 815 ntBASIC20.61■□□□□ 0.89
Sned1Q70E20 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC20.61■□□□□ 0.89
Sned1Q70E20 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
Sned1Q70E20 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Sned1Q70E20 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Sned1Q70E20 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Sned1Q70E20 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC20.61■□□□□ 0.89
Sned1Q70E20 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC20.61■□□□□ 0.89
Sned1Q70E20 Haghl-211ENSMUST00000150324 1267 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Sned1Q70E20 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC20.61■□□□□ 0.89
Sned1Q70E20 Rhbdl1-202ENSMUST00000183929 1349 ntTSL 5 BASIC20.6■□□□□ 0.89
Sned1Q70E20 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC20.6■□□□□ 0.89
Sned1Q70E20 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Sned1Q70E20 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Sned1Q70E20 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Sned1Q70E20 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Sned1Q70E20 Gm13036-201ENSMUST00000117799 748 ntBASIC20.6■□□□□ 0.89
Sned1Q70E20 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC20.6■□□□□ 0.89
Sned1Q70E20 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Sned1Q70E20 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC20.6■□□□□ 0.89
Sned1Q70E20 Gm27628-201ENSMUST00000184911 107 ntBASIC20.6■□□□□ 0.89
Sned1Q70E20 Zfp787-205ENSMUST00000207957 880 ntTSL 5 BASIC20.6■□□□□ 0.89
Sned1Q70E20 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
Sned1Q70E20 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Sned1Q70E20 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Sned1Q70E20 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Sned1Q70E20 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Sned1Q70E20 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
Sned1Q70E20 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Sned1Q70E20 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Sned1Q70E20 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Sned1Q70E20 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Sned1Q70E20 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Sned1Q70E20 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
Sned1Q70E20 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Sned1Q70E20 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Sned1Q70E20 Bola3-202ENSMUST00000120040 583 ntTSL 3 BASIC20.59■□□□□ 0.89
Sned1Q70E20 Rasd2-201ENSMUST00000132133 1299 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Sned1Q70E20 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC20.59■□□□□ 0.89
Sned1Q70E20 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC20.59■□□□□ 0.89
Sned1Q70E20 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Sned1Q70E20 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Sned1Q70E20 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Sned1Q70E20 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Sned1Q70E20 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Sned1Q70E20 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Sned1Q70E20 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 20.5 ms