Protein–RNA interactions for Protein: Q6QIY3

Scn10a, Sodium channel protein type 10 subunit alpha, mousemouse

Predictions only

Length 1,958 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn10aQ6QIY3 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC19.33■□□□□ 0.68
Scn10aQ6QIY3 AC159093.1-201ENSMUST00000227779 380 ntBASIC19.33■□□□□ 0.68
Scn10aQ6QIY3 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Scn10aQ6QIY3 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Scn10aQ6QIY3 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Scn10aQ6QIY3 Gm27702-201ENSMUST00000184512 56 ntBASIC19.32■□□□□ 0.68
Scn10aQ6QIY3 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Scn10aQ6QIY3 Psmb5-202ENSMUST00000227257 622 ntBASIC19.32■□□□□ 0.68
Scn10aQ6QIY3 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC19.32■□□□□ 0.68
Scn10aQ6QIY3 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Scn10aQ6QIY3 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Scn10aQ6QIY3 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC19.32■□□□□ 0.68
Scn10aQ6QIY3 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Scn10aQ6QIY3 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Scn10aQ6QIY3 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Scn10aQ6QIY3 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Scn10aQ6QIY3 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
Scn10aQ6QIY3 Gm5264-201ENSMUST00000190584 848 ntBASIC19.32■□□□□ 0.68
Scn10aQ6QIY3 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
Scn10aQ6QIY3 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Scn10aQ6QIY3 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Scn10aQ6QIY3 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Scn10aQ6QIY3 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Scn10aQ6QIY3 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Scn10aQ6QIY3 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Scn10aQ6QIY3 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
Scn10aQ6QIY3 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Scn10aQ6QIY3 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Scn10aQ6QIY3 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC19.31■□□□□ 0.68
Scn10aQ6QIY3 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Scn10aQ6QIY3 AL590614.2-201ENSMUST00000225374 1937 ntBASIC19.31■□□□□ 0.68
Scn10aQ6QIY3 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
Scn10aQ6QIY3 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
Scn10aQ6QIY3 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC19.31■□□□□ 0.68
Scn10aQ6QIY3 Gm42670-201ENSMUST00000201816 1292 ntBASIC19.31■□□□□ 0.68
Scn10aQ6QIY3 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Scn10aQ6QIY3 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Scn10aQ6QIY3 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Scn10aQ6QIY3 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Scn10aQ6QIY3 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC19.31■□□□□ 0.68
Scn10aQ6QIY3 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Scn10aQ6QIY3 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Scn10aQ6QIY3 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Scn10aQ6QIY3 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Scn10aQ6QIY3 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
Scn10aQ6QIY3 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Scn10aQ6QIY3 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC19.3■□□□□ 0.68
Scn10aQ6QIY3 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Scn10aQ6QIY3 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
Scn10aQ6QIY3 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
Scn10aQ6QIY3 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Scn10aQ6QIY3 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Scn10aQ6QIY3 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Scn10aQ6QIY3 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
Scn10aQ6QIY3 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
Scn10aQ6QIY3 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Scn10aQ6QIY3 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Scn10aQ6QIY3 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Scn10aQ6QIY3 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Scn10aQ6QIY3 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC19.29■□□□□ 0.68
Scn10aQ6QIY3 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Scn10aQ6QIY3 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Scn10aQ6QIY3 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Scn10aQ6QIY3 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Scn10aQ6QIY3 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
Scn10aQ6QIY3 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Scn10aQ6QIY3 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Scn10aQ6QIY3 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC19.29■□□□□ 0.68
Scn10aQ6QIY3 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Scn10aQ6QIY3 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC19.29■□□□□ 0.68
Scn10aQ6QIY3 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC19.29■□□□□ 0.68
Scn10aQ6QIY3 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
Scn10aQ6QIY3 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Scn10aQ6QIY3 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Scn10aQ6QIY3 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Scn10aQ6QIY3 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Scn10aQ6QIY3 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
Scn10aQ6QIY3 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Scn10aQ6QIY3 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
Scn10aQ6QIY3 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Scn10aQ6QIY3 Gfra2-202ENSMUST00000227633 1480 ntBASIC19.29■□□□□ 0.68
Scn10aQ6QIY3 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
Scn10aQ6QIY3 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
Scn10aQ6QIY3 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Scn10aQ6QIY3 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Scn10aQ6QIY3 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Scn10aQ6QIY3 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Scn10aQ6QIY3 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Scn10aQ6QIY3 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Scn10aQ6QIY3 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
Scn10aQ6QIY3 AC154527.4-201ENSMUST00000224364 1667 ntBASIC19.28■□□□□ 0.68
Scn10aQ6QIY3 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC19.28■□□□□ 0.68
Scn10aQ6QIY3 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC19.28■□□□□ 0.68
Scn10aQ6QIY3 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Scn10aQ6QIY3 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC19.28■□□□□ 0.68
Scn10aQ6QIY3 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Scn10aQ6QIY3 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Scn10aQ6QIY3 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC19.28■□□□□ 0.68
Scn10aQ6QIY3 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Scn10aQ6QIY3 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 41.6 ms