Protein–RNA interactions for Protein: Q6PR54

Rif1, Telomere-associated protein RIF1, mousemouse

Known RBP Predictions only

Length 2,419 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rif1Q6PR54 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rif1Q6PR54 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rif1Q6PR54 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rif1Q6PR54 Gm5540-201ENSMUST00000131852 1848 ntBASIC14.35□□□□□ -0.11
Rif1Q6PR54 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Rif1Q6PR54 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Rif1Q6PR54 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC14.35□□□□□ -0.11
Rif1Q6PR54 Acyp1-203ENSMUST00000117138 735 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
Rif1Q6PR54 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC14.35□□□□□ -0.11
Rif1Q6PR54 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC14.35□□□□□ -0.11
Rif1Q6PR54 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Rif1Q6PR54 Tmub1-201ENSMUST00000030799 1333 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rif1Q6PR54 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC14.35□□□□□ -0.11
Rif1Q6PR54 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rif1Q6PR54 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rif1Q6PR54 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rif1Q6PR54 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Rif1Q6PR54 Meig1-204ENSMUST00000115083 567 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
Rif1Q6PR54 Pdzd11-202ENSMUST00000059099 1041 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rif1Q6PR54 Gm11937-201ENSMUST00000076478 396 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Rif1Q6PR54 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rif1Q6PR54 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Rif1Q6PR54 Adk-201ENSMUST00000045376 1782 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rif1Q6PR54 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Rif1Q6PR54 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rif1Q6PR54 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC14.35□□□□□ -0.11
Rif1Q6PR54 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rif1Q6PR54 Rhox7b-201ENSMUST00000115156 1091 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rif1Q6PR54 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rif1Q6PR54 Gm37667-201ENSMUST00000193103 752 ntTSL 5 BASIC14.34□□□□□ -0.11
Rif1Q6PR54 Miox-201ENSMUST00000023282 1130 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rif1Q6PR54 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rif1Q6PR54 Syce1l-201ENSMUST00000034219 896 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rif1Q6PR54 Rassf8-202ENSMUST00000058538 1131 ntBASIC14.34□□□□□ -0.11
Rif1Q6PR54 Syce1l-202ENSMUST00000095173 791 ntAPPRIS P4 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rif1Q6PR54 Rhox7a-201ENSMUST00000096454 983 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rif1Q6PR54 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rif1Q6PR54 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rif1Q6PR54 Gm14268-201ENSMUST00000132465 682 ntTSL 3 BASIC14.34□□□□□ -0.11
Rif1Q6PR54 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Rif1Q6PR54 Gm11780-201ENSMUST00000136880 516 ntBASIC14.34□□□□□ -0.11
Rif1Q6PR54 Gm26935-201ENSMUST00000182686 519 ntTSL 5 BASIC14.34□□□□□ -0.11
Rif1Q6PR54 Ube2f-210ENSMUST00000191368 1110 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rif1Q6PR54 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC14.34□□□□□ -0.11
Rif1Q6PR54 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rif1Q6PR54 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rif1Q6PR54 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rif1Q6PR54 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Rif1Q6PR54 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Rif1Q6PR54 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rif1Q6PR54 Zkscan4-202ENSMUST00000225845 1506 ntBASIC14.33□□□□□ -0.11
Rif1Q6PR54 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
Rif1Q6PR54 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC14.33□□□□□ -0.12
Rif1Q6PR54 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Rif1Q6PR54 Cldn13-201ENSMUST00000008987 1067 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rif1Q6PR54 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Rif1Q6PR54 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rif1Q6PR54 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rif1Q6PR54 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC14.33□□□□□ -0.12
Rif1Q6PR54 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Rif1Q6PR54 Zfp637-202ENSMUST00000112859 421 ntTSL 2 BASIC14.33□□□□□ -0.12
Rif1Q6PR54 Cdkn1a-203ENSMUST00000122348 857 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rif1Q6PR54 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC14.33□□□□□ -0.12
Rif1Q6PR54 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC14.33□□□□□ -0.12
Rif1Q6PR54 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Rif1Q6PR54 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rif1Q6PR54 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rif1Q6PR54 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Rif1Q6PR54 Asphd1-202ENSMUST00000106339 518 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rif1Q6PR54 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC14.32□□□□□ -0.12
Rif1Q6PR54 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rif1Q6PR54 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rif1Q6PR54 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Rif1Q6PR54 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Rif1Q6PR54 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rif1Q6PR54 Zfp511-201ENSMUST00000168194 1076 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
Rif1Q6PR54 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rif1Q6PR54 CT030161.3-201ENSMUST00000218235 367 ntTSL 3 BASIC14.32□□□□□ -0.12
Rif1Q6PR54 Mesp1-201ENSMUST00000032760 1275 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rif1Q6PR54 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rif1Q6PR54 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Rif1Q6PR54 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rif1Q6PR54 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rif1Q6PR54 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
Rif1Q6PR54 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rif1Q6PR54 Mrto4-202ENSMUST00000102503 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rif1Q6PR54 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Rif1Q6PR54 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC14.31□□□□□ -0.12
Rif1Q6PR54 Cox6b2-203ENSMUST00000182111 585 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rif1Q6PR54 Gm27628-201ENSMUST00000184911 107 ntBASIC14.31□□□□□ -0.12
Rif1Q6PR54 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rif1Q6PR54 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rif1Q6PR54 Med8-202ENSMUST00000073881 1052 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Rif1Q6PR54 Olfr541-201ENSMUST00000080681 1103 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Rif1Q6PR54 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rif1Q6PR54 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rif1Q6PR54 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rif1Q6PR54 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Rif1Q6PR54 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Rif1Q6PR54 Tmem269-202ENSMUST00000212054 1504 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 38.3 ms