Protein–RNA interactions for Protein: Q6PCM1

Kdm3a, Lysine-specific demethylase 3A, mousemouse

Predictions only

Length 1,323 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Kdm3aQ6PCM1 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Kdm3aQ6PCM1 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Kdm3aQ6PCM1 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Kdm3aQ6PCM1 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Kdm3aQ6PCM1 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC20.58■□□□□ 0.88
Kdm3aQ6PCM1 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC20.58■□□□□ 0.88
Kdm3aQ6PCM1 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Kdm3aQ6PCM1 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC20.58■□□□□ 0.88
Kdm3aQ6PCM1 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Kdm3aQ6PCM1 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC20.57■□□□□ 0.88
Kdm3aQ6PCM1 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Kdm3aQ6PCM1 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Kdm3aQ6PCM1 Gm10461-201ENSMUST00000202073 4786 ntBASIC20.57■□□□□ 0.88
Kdm3aQ6PCM1 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Kdm3aQ6PCM1 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Kdm3aQ6PCM1 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Kdm3aQ6PCM1 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC20.57■□□□□ 0.88
Kdm3aQ6PCM1 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC20.57■□□□□ 0.88
Kdm3aQ6PCM1 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Kdm3aQ6PCM1 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Kdm3aQ6PCM1 Cxcl14-202ENSMUST00000224801 1467 ntBASIC20.57■□□□□ 0.88
Kdm3aQ6PCM1 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Kdm3aQ6PCM1 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
Kdm3aQ6PCM1 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Kdm3aQ6PCM1 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Kdm3aQ6PCM1 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Kdm3aQ6PCM1 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Kdm3aQ6PCM1 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC20.57■□□□□ 0.88
Kdm3aQ6PCM1 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Kdm3aQ6PCM1 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Kdm3aQ6PCM1 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Kdm3aQ6PCM1 Gm43808-201ENSMUST00000202534 2065 ntBASIC20.56■□□□□ 0.88
Kdm3aQ6PCM1 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Kdm3aQ6PCM1 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC20.56■□□□□ 0.88
Kdm3aQ6PCM1 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC20.56■□□□□ 0.88
Kdm3aQ6PCM1 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC20.56■□□□□ 0.88
Kdm3aQ6PCM1 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Kdm3aQ6PCM1 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Kdm3aQ6PCM1 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Kdm3aQ6PCM1 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Kdm3aQ6PCM1 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Kdm3aQ6PCM1 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Kdm3aQ6PCM1 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Kdm3aQ6PCM1 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC20.56■□□□□ 0.88
Kdm3aQ6PCM1 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
Kdm3aQ6PCM1 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
Kdm3aQ6PCM1 Gm18115-201ENSMUST00000221209 621 ntBASIC20.55■□□□□ 0.88
Kdm3aQ6PCM1 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Kdm3aQ6PCM1 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Kdm3aQ6PCM1 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Kdm3aQ6PCM1 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Kdm3aQ6PCM1 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Kdm3aQ6PCM1 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Kdm3aQ6PCM1 Gm37519-201ENSMUST00000191687 2210 ntBASIC20.55■□□□□ 0.88
Kdm3aQ6PCM1 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Kdm3aQ6PCM1 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC20.55■□□□□ 0.88
Kdm3aQ6PCM1 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Kdm3aQ6PCM1 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Kdm3aQ6PCM1 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Kdm3aQ6PCM1 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Kdm3aQ6PCM1 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC20.55■□□□□ 0.88
Kdm3aQ6PCM1 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Kdm3aQ6PCM1 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
Kdm3aQ6PCM1 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Kdm3aQ6PCM1 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Kdm3aQ6PCM1 Gm11860-201ENSMUST00000122346 1010 ntBASIC20.54■□□□□ 0.88
Kdm3aQ6PCM1 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Kdm3aQ6PCM1 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC20.54■□□□□ 0.88
Kdm3aQ6PCM1 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
Kdm3aQ6PCM1 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC20.54■□□□□ 0.88
Kdm3aQ6PCM1 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Kdm3aQ6PCM1 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC20.54■□□□□ 0.88
Kdm3aQ6PCM1 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Kdm3aQ6PCM1 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
Kdm3aQ6PCM1 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC20.54■□□□□ 0.88
Kdm3aQ6PCM1 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Kdm3aQ6PCM1 Gm44832-201ENSMUST00000208849 2303 ntBASIC20.54■□□□□ 0.88
Kdm3aQ6PCM1 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Kdm3aQ6PCM1 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Kdm3aQ6PCM1 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Kdm3aQ6PCM1 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Kdm3aQ6PCM1 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC20.54■□□□□ 0.88
Kdm3aQ6PCM1 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC20.53■□□□□ 0.88
Kdm3aQ6PCM1 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC20.53■□□□□ 0.88
Kdm3aQ6PCM1 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Kdm3aQ6PCM1 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
Kdm3aQ6PCM1 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
Kdm3aQ6PCM1 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
Kdm3aQ6PCM1 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Kdm3aQ6PCM1 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
Kdm3aQ6PCM1 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Kdm3aQ6PCM1 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Kdm3aQ6PCM1 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Kdm3aQ6PCM1 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Kdm3aQ6PCM1 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Kdm3aQ6PCM1 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Kdm3aQ6PCM1 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Kdm3aQ6PCM1 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Kdm3aQ6PCM1 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Kdm3aQ6PCM1 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 27.6 ms