Protein–RNA interactions for Protein: Q6PAV2

Herc4, Probable E3 ubiquitin-protein ligase HERC4, mousemouse

Predictions only

Length 1,057 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Herc4Q6PAV2 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Herc4Q6PAV2 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Herc4Q6PAV2 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Herc4Q6PAV2 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Herc4Q6PAV2 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Herc4Q6PAV2 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
Herc4Q6PAV2 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Herc4Q6PAV2 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC18.85■□□□□ 0.61
Herc4Q6PAV2 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Herc4Q6PAV2 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Herc4Q6PAV2 Gm19439-201ENSMUST00000198195 2273 ntBASIC18.85■□□□□ 0.61
Herc4Q6PAV2 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Herc4Q6PAV2 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
Herc4Q6PAV2 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Herc4Q6PAV2 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
Herc4Q6PAV2 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Herc4Q6PAV2 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Herc4Q6PAV2 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Herc4Q6PAV2 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Herc4Q6PAV2 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Herc4Q6PAV2 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Herc4Q6PAV2 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
Herc4Q6PAV2 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Herc4Q6PAV2 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC18.84■□□□□ 0.61
Herc4Q6PAV2 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Herc4Q6PAV2 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
Herc4Q6PAV2 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
Herc4Q6PAV2 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Herc4Q6PAV2 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Herc4Q6PAV2 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC18.84■□□□□ 0.61
Herc4Q6PAV2 Gm5417-201ENSMUST00000079706 384 ntBASIC18.84■□□□□ 0.61
Herc4Q6PAV2 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Herc4Q6PAV2 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Herc4Q6PAV2 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC18.84■□□□□ 0.61
Herc4Q6PAV2 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Herc4Q6PAV2 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Herc4Q6PAV2 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Herc4Q6PAV2 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC18.84■□□□□ 0.61
Herc4Q6PAV2 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
Herc4Q6PAV2 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
Herc4Q6PAV2 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Herc4Q6PAV2 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Herc4Q6PAV2 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Herc4Q6PAV2 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Herc4Q6PAV2 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Herc4Q6PAV2 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Herc4Q6PAV2 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Herc4Q6PAV2 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Herc4Q6PAV2 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
Herc4Q6PAV2 AC135963.1-201ENSMUST00000211640 717 ntBASIC18.83■□□□□ 0.6
Herc4Q6PAV2 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Herc4Q6PAV2 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Herc4Q6PAV2 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Herc4Q6PAV2 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Herc4Q6PAV2 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Herc4Q6PAV2 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Herc4Q6PAV2 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
Herc4Q6PAV2 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
Herc4Q6PAV2 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Herc4Q6PAV2 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Herc4Q6PAV2 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Herc4Q6PAV2 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Herc4Q6PAV2 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
Herc4Q6PAV2 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Herc4Q6PAV2 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Herc4Q6PAV2 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Herc4Q6PAV2 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Herc4Q6PAV2 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Herc4Q6PAV2 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
Herc4Q6PAV2 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Herc4Q6PAV2 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC18.82■□□□□ 0.6
Herc4Q6PAV2 AC120002.2-201ENSMUST00000220205 773 ntBASIC18.82■□□□□ 0.6
Herc4Q6PAV2 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Herc4Q6PAV2 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
Herc4Q6PAV2 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Herc4Q6PAV2 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Herc4Q6PAV2 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Herc4Q6PAV2 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Herc4Q6PAV2 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Herc4Q6PAV2 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Herc4Q6PAV2 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Herc4Q6PAV2 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Herc4Q6PAV2 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Herc4Q6PAV2 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Herc4Q6PAV2 Gm37055-201ENSMUST00000191866 133 ntBASIC18.81■□□□□ 0.6
Herc4Q6PAV2 Gm9484-201ENSMUST00000195892 1159 ntBASIC18.81■□□□□ 0.6
Herc4Q6PAV2 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC18.81■□□□□ 0.6
Herc4Q6PAV2 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC18.81■□□□□ 0.6
Herc4Q6PAV2 Gm7791-201ENSMUST00000219066 539 ntBASIC18.81■□□□□ 0.6
Herc4Q6PAV2 Il3ra-202ENSMUST00000223589 738 ntBASIC18.81■□□□□ 0.6
Herc4Q6PAV2 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Herc4Q6PAV2 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
Herc4Q6PAV2 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Herc4Q6PAV2 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Herc4Q6PAV2 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Herc4Q6PAV2 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Herc4Q6PAV2 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
Herc4Q6PAV2 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Herc4Q6PAV2 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
Herc4Q6PAV2 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 51.5 ms