Protein–RNA interactions for Protein: Q6P2L7

Casc4, Protein CASC4, mousemouse

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Casc4Q6P2L7 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Casc4Q6P2L7 Gm19721-201ENSMUST00000195284 1764 ntBASIC17.28■□□□□ 0.36
Casc4Q6P2L7 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Casc4Q6P2L7 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Casc4Q6P2L7 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Casc4Q6P2L7 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
Casc4Q6P2L7 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Casc4Q6P2L7 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC17.27■□□□□ 0.36
Casc4Q6P2L7 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC17.27■□□□□ 0.36
Casc4Q6P2L7 AC135963.1-201ENSMUST00000211640 717 ntBASIC17.27■□□□□ 0.36
Casc4Q6P2L7 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC17.27■□□□□ 0.36
Casc4Q6P2L7 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Casc4Q6P2L7 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Casc4Q6P2L7 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Casc4Q6P2L7 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Casc4Q6P2L7 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.35
Casc4Q6P2L7 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.35
Casc4Q6P2L7 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Casc4Q6P2L7 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC17.26■□□□□ 0.35
Casc4Q6P2L7 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Casc4Q6P2L7 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Casc4Q6P2L7 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Casc4Q6P2L7 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Casc4Q6P2L7 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Casc4Q6P2L7 Gm43338-201ENSMUST00000198617 2223 ntBASIC17.26■□□□□ 0.35
Casc4Q6P2L7 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Casc4Q6P2L7 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Casc4Q6P2L7 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Casc4Q6P2L7 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Casc4Q6P2L7 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Casc4Q6P2L7 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Casc4Q6P2L7 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
Casc4Q6P2L7 Gm37519-201ENSMUST00000191687 2210 ntBASIC17.25■□□□□ 0.35
Casc4Q6P2L7 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Casc4Q6P2L7 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Casc4Q6P2L7 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Casc4Q6P2L7 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
Casc4Q6P2L7 Gm43294-201ENSMUST00000202850 2490 ntBASIC17.25■□□□□ 0.35
Casc4Q6P2L7 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Casc4Q6P2L7 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Casc4Q6P2L7 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Casc4Q6P2L7 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Casc4Q6P2L7 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC17.25■□□□□ 0.35
Casc4Q6P2L7 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
Casc4Q6P2L7 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC17.25■□□□□ 0.35
Casc4Q6P2L7 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Casc4Q6P2L7 Gm30025-201ENSMUST00000218555 728 ntBASIC17.25■□□□□ 0.35
Casc4Q6P2L7 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC17.25■□□□□ 0.35
Casc4Q6P2L7 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Casc4Q6P2L7 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Casc4Q6P2L7 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Casc4Q6P2L7 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Casc4Q6P2L7 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC17.25■□□□□ 0.35
Casc4Q6P2L7 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Casc4Q6P2L7 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Casc4Q6P2L7 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Casc4Q6P2L7 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
Casc4Q6P2L7 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Casc4Q6P2L7 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Casc4Q6P2L7 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Casc4Q6P2L7 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Casc4Q6P2L7 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC17.24■□□□□ 0.35
Casc4Q6P2L7 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Casc4Q6P2L7 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Casc4Q6P2L7 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Casc4Q6P2L7 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Casc4Q6P2L7 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Casc4Q6P2L7 Gm15565-201ENSMUST00000118890 427 ntBASIC17.24■□□□□ 0.35
Casc4Q6P2L7 Gm37025-201ENSMUST00000195159 829 ntBASIC17.24■□□□□ 0.35
Casc4Q6P2L7 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Casc4Q6P2L7 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
Casc4Q6P2L7 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC17.24■□□□□ 0.35
Casc4Q6P2L7 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Casc4Q6P2L7 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Casc4Q6P2L7 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Casc4Q6P2L7 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Casc4Q6P2L7 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Casc4Q6P2L7 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Casc4Q6P2L7 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Casc4Q6P2L7 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Casc4Q6P2L7 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC17.23■□□□□ 0.35
Casc4Q6P2L7 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC17.23■□□□□ 0.35
Casc4Q6P2L7 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Casc4Q6P2L7 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Casc4Q6P2L7 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC17.23■□□□□ 0.35
Casc4Q6P2L7 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Casc4Q6P2L7 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
Casc4Q6P2L7 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
Casc4Q6P2L7 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Casc4Q6P2L7 Gm7638-201ENSMUST00000121348 967 ntBASIC17.23■□□□□ 0.35
Casc4Q6P2L7 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC17.23■□□□□ 0.35
Casc4Q6P2L7 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Casc4Q6P2L7 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Casc4Q6P2L7 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Casc4Q6P2L7 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC17.23■□□□□ 0.35
Casc4Q6P2L7 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
Casc4Q6P2L7 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
Casc4Q6P2L7 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Casc4Q6P2L7 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Casc4Q6P2L7 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 31.7 ms