Protein–RNA interactions for Protein: Q6IRU2

Tpm4, Tropomyosin alpha-4 chain, mousemouse

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm4Q6IRU2 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
Tpm4Q6IRU2 Gm2559-201ENSMUST00000201323 363 ntBASIC19.1■□□□□ 0.65
Tpm4Q6IRU2 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
Tpm4Q6IRU2 Gm4968-201ENSMUST00000071458 858 ntBASIC19.1■□□□□ 0.65
Tpm4Q6IRU2 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
Tpm4Q6IRU2 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Tpm4Q6IRU2 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Tpm4Q6IRU2 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Tpm4Q6IRU2 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Tpm4Q6IRU2 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Tpm4Q6IRU2 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Tpm4Q6IRU2 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Tpm4Q6IRU2 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Tpm4Q6IRU2 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC19.09■□□□□ 0.65
Tpm4Q6IRU2 Gm3807-201ENSMUST00000193520 1168 ntBASIC19.09■□□□□ 0.65
Tpm4Q6IRU2 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC19.09■□□□□ 0.65
Tpm4Q6IRU2 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Tpm4Q6IRU2 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC19.09■□□□□ 0.65
Tpm4Q6IRU2 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
Tpm4Q6IRU2 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Tpm4Q6IRU2 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Tpm4Q6IRU2 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
Tpm4Q6IRU2 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Tpm4Q6IRU2 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
Tpm4Q6IRU2 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Tpm4Q6IRU2 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC19.09■□□□□ 0.65
Tpm4Q6IRU2 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Tpm4Q6IRU2 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Tpm4Q6IRU2 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Tpm4Q6IRU2 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Tpm4Q6IRU2 Camsap1-202ENSMUST00000114167 7981 ntAPPRIS P2 TSL 5 BASIC19.08■□□□□ 0.65
Tpm4Q6IRU2 Camsap1-201ENSMUST00000091268 7978 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.65
Tpm4Q6IRU2 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.65
Tpm4Q6IRU2 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Tpm4Q6IRU2 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Tpm4Q6IRU2 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.65
Tpm4Q6IRU2 Mir6349-201ENSMUST00000184059 97 ntBASIC19.08■□□□□ 0.64
Tpm4Q6IRU2 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC19.08■□□□□ 0.64
Tpm4Q6IRU2 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Tpm4Q6IRU2 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC19.08■□□□□ 0.64
Tpm4Q6IRU2 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Tpm4Q6IRU2 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Tpm4Q6IRU2 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Tpm4Q6IRU2 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC19.08■□□□□ 0.64
Tpm4Q6IRU2 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Tpm4Q6IRU2 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
Tpm4Q6IRU2 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Tpm4Q6IRU2 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC19.07■□□□□ 0.64
Tpm4Q6IRU2 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC19.07■□□□□ 0.64
Tpm4Q6IRU2 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Tpm4Q6IRU2 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Tpm4Q6IRU2 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Tpm4Q6IRU2 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
Tpm4Q6IRU2 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Tpm4Q6IRU2 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Tpm4Q6IRU2 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC19.07■□□□□ 0.64
Tpm4Q6IRU2 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC19.07■□□□□ 0.64
Tpm4Q6IRU2 AC122769.4-201ENSMUST00000228166 901 ntBASIC19.07■□□□□ 0.64
Tpm4Q6IRU2 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
Tpm4Q6IRU2 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC19.07■□□□□ 0.64
Tpm4Q6IRU2 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Tpm4Q6IRU2 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Tpm4Q6IRU2 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
Tpm4Q6IRU2 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC19.07■□□□□ 0.64
Tpm4Q6IRU2 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC19.07■□□□□ 0.64
Tpm4Q6IRU2 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC19.07■□□□□ 0.64
Tpm4Q6IRU2 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Tpm4Q6IRU2 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Tpm4Q6IRU2 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Tpm4Q6IRU2 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Tpm4Q6IRU2 AC154231.1-201ENSMUST00000220564 2175 ntBASIC19.06■□□□□ 0.64
Tpm4Q6IRU2 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Tpm4Q6IRU2 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC19.06■□□□□ 0.64
Tpm4Q6IRU2 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Tpm4Q6IRU2 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Tpm4Q6IRU2 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
Tpm4Q6IRU2 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Tpm4Q6IRU2 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Tpm4Q6IRU2 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Tpm4Q6IRU2 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC19.06■□□□□ 0.64
Tpm4Q6IRU2 Gm10138-203ENSMUST00000206952 366 ntBASIC19.06■□□□□ 0.64
Tpm4Q6IRU2 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC19.06■□□□□ 0.64
Tpm4Q6IRU2 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Tpm4Q6IRU2 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Tpm4Q6IRU2 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
Tpm4Q6IRU2 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Tpm4Q6IRU2 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Tpm4Q6IRU2 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Tpm4Q6IRU2 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Tpm4Q6IRU2 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Tpm4Q6IRU2 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Tpm4Q6IRU2 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Tpm4Q6IRU2 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC19.05■□□□□ 0.64
Tpm4Q6IRU2 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC19.05■□□□□ 0.64
Tpm4Q6IRU2 Gm11643-201ENSMUST00000119578 864 ntBASIC19.05■□□□□ 0.64
Tpm4Q6IRU2 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Tpm4Q6IRU2 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Tpm4Q6IRU2 Mtag2-201ENSMUST00000058665 714 ntBASIC19.05■□□□□ 0.64
Tpm4Q6IRU2 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
Tpm4Q6IRU2 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Retrieved 100 of 76,532 protein–RNA pairs in 55.1 ms