Protein–RNA interactions for Protein: Q64727

Vcl, Vinculin, mousemouse

Known RBP Predictions only

Length 1,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VclQ64727 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
VclQ64727 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC16.78■□□□□ 0.28
VclQ64727 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
VclQ64727 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC16.78■□□□□ 0.28
VclQ64727 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
VclQ64727 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
VclQ64727 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
VclQ64727 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
VclQ64727 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
VclQ64727 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
VclQ64727 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
VclQ64727 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
VclQ64727 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
VclQ64727 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
VclQ64727 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
VclQ64727 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
VclQ64727 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
VclQ64727 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
VclQ64727 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
VclQ64727 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC16.77■□□□□ 0.28
VclQ64727 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
VclQ64727 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
VclQ64727 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
VclQ64727 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC16.77■□□□□ 0.27
VclQ64727 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
VclQ64727 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
VclQ64727 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC16.76■□□□□ 0.27
VclQ64727 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
VclQ64727 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC16.76■□□□□ 0.27
VclQ64727 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC16.76■□□□□ 0.27
VclQ64727 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
VclQ64727 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
VclQ64727 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC16.76■□□□□ 0.27
VclQ64727 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC16.76■□□□□ 0.27
VclQ64727 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC16.76■□□□□ 0.27
VclQ64727 Gm13474-201ENSMUST00000122466 815 ntBASIC16.76■□□□□ 0.27
VclQ64727 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
VclQ64727 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC16.76■□□□□ 0.27
VclQ64727 AC158538.1-201ENSMUST00000225870 294 ntBASIC16.76■□□□□ 0.27
VclQ64727 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
VclQ64727 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
VclQ64727 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
VclQ64727 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
VclQ64727 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
VclQ64727 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC16.76■□□□□ 0.27
VclQ64727 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
VclQ64727 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
VclQ64727 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
VclQ64727 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
VclQ64727 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
VclQ64727 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
VclQ64727 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
VclQ64727 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
VclQ64727 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
VclQ64727 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
VclQ64727 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
VclQ64727 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
VclQ64727 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
VclQ64727 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
VclQ64727 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
VclQ64727 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
VclQ64727 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
VclQ64727 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
VclQ64727 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
VclQ64727 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC16.75■□□□□ 0.27
VclQ64727 AC121577.1-201ENSMUST00000227302 707 ntBASIC16.75■□□□□ 0.27
VclQ64727 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC16.75■□□□□ 0.27
VclQ64727 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
VclQ64727 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
VclQ64727 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
VclQ64727 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
VclQ64727 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
VclQ64727 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
VclQ64727 AC125311.2-201ENSMUST00000227477 1940 ntBASIC16.74■□□□□ 0.27
VclQ64727 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
VclQ64727 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
VclQ64727 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
VclQ64727 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
VclQ64727 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
VclQ64727 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC16.74■□□□□ 0.27
VclQ64727 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
VclQ64727 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC16.74■□□□□ 0.27
VclQ64727 Gm16061-201ENSMUST00000122167 857 ntBASIC16.74■□□□□ 0.27
VclQ64727 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC16.74■□□□□ 0.27
VclQ64727 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
VclQ64727 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
VclQ64727 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
VclQ64727 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
VclQ64727 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
VclQ64727 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC16.74■□□□□ 0.27
VclQ64727 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
VclQ64727 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC16.74■□□□□ 0.27
VclQ64727 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
VclQ64727 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
VclQ64727 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
VclQ64727 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
VclQ64727 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
VclQ64727 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
VclQ64727 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
VclQ64727 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 20.9 ms