Protein–RNA interactions for Protein: Q64336

Tbr1, T-box brain protein 1, mousemouse

Predictions only

Length 681 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tbr1Q64336 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Tbr1Q64336 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Tbr1Q64336 Eif5a-203ENSMUST00000071026 1286 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Tbr1Q64336 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Tbr1Q64336 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Tbr1Q64336 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Tbr1Q64336 Idnk-204ENSMUST00000226010 1898 ntBASIC15.29■□□□□ 0.04
Tbr1Q64336 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Tbr1Q64336 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC15.29■□□□□ 0.04
Tbr1Q64336 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Tbr1Q64336 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Tbr1Q64336 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Tbr1Q64336 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Tbr1Q64336 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Tbr1Q64336 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Tbr1Q64336 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC15.29■□□□□ 0.04
Tbr1Q64336 Prss45-202ENSMUST00000146794 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Tbr1Q64336 AC153794.1-201ENSMUST00000169148 126 ntBASIC15.29■□□□□ 0.04
Tbr1Q64336 Gm27000-201ENSMUST00000182943 842 ntBASIC15.29■□□□□ 0.04
Tbr1Q64336 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Tbr1Q64336 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC15.29■□□□□ 0.04
Tbr1Q64336 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Tbr1Q64336 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Tbr1Q64336 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Tbr1Q64336 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Tbr1Q64336 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Tbr1Q64336 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Tbr1Q64336 Phf7-203ENSMUST00000226565 1971 ntBASIC15.28■□□□□ 0.04
Tbr1Q64336 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Tbr1Q64336 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Tbr1Q64336 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Tbr1Q64336 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC15.28■□□□□ 0.04
Tbr1Q64336 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Tbr1Q64336 Rprl3-201ENSMUST00000157400 290 ntBASIC15.28■□□□□ 0.04
Tbr1Q64336 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC15.28■□□□□ 0.04
Tbr1Q64336 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Tbr1Q64336 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Tbr1Q64336 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC15.28■□□□□ 0.04
Tbr1Q64336 Gm2213-201ENSMUST00000197485 688 ntBASIC15.28■□□□□ 0.04
Tbr1Q64336 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Tbr1Q64336 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Tbr1Q64336 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Tbr1Q64336 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Tbr1Q64336 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Tbr1Q64336 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Tbr1Q64336 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Tbr1Q64336 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Tbr1Q64336 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Tbr1Q64336 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Tbr1Q64336 Gm5784-201ENSMUST00000179344 2478 ntBASIC15.27■□□□□ 0.04
Tbr1Q64336 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Tbr1Q64336 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Tbr1Q64336 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC15.27■□□□□ 0.04
Tbr1Q64336 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Tbr1Q64336 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Tbr1Q64336 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC15.27■□□□□ 0.04
Tbr1Q64336 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC15.27■□□□□ 0.04
Tbr1Q64336 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC15.27■□□□□ 0.04
Tbr1Q64336 AC160338.1-201ENSMUST00000214232 705 ntBASIC15.27■□□□□ 0.04
Tbr1Q64336 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Tbr1Q64336 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Tbr1Q64336 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Tbr1Q64336 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Tbr1Q64336 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Tbr1Q64336 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Tbr1Q64336 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Tbr1Q64336 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
Tbr1Q64336 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
Tbr1Q64336 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Tbr1Q64336 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
Tbr1Q64336 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
Tbr1Q64336 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Tbr1Q64336 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Tbr1Q64336 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC15.26■□□□□ 0.03
Tbr1Q64336 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Tbr1Q64336 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Tbr1Q64336 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Tbr1Q64336 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Tbr1Q64336 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Tbr1Q64336 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC15.26■□□□□ 0.03
Tbr1Q64336 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Tbr1Q64336 Psmb1-201ENSMUST00000014913 1036 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Tbr1Q64336 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC15.26■□□□□ 0.03
Tbr1Q64336 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC15.26■□□□□ 0.03
Tbr1Q64336 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC15.26■□□□□ 0.03
Tbr1Q64336 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Tbr1Q64336 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Tbr1Q64336 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Tbr1Q64336 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Tbr1Q64336 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Tbr1Q64336 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Tbr1Q64336 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC15.26■□□□□ 0.03
Tbr1Q64336 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Tbr1Q64336 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Tbr1Q64336 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Tbr1Q64336 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Tbr1Q64336 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Tbr1Q64336 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Tbr1Q64336 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Tbr1Q64336 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 20.4 ms