Protein–RNA interactions for Protein: Q62233

Six3, Homeobox protein SIX3, mousemouse

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six3Q62233 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Six3Q62233 Gm29257-201ENSMUST00000186115 639 ntBASIC16.67■□□□□ 0.26
Six3Q62233 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
Six3Q62233 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Six3Q62233 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Six3Q62233 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Six3Q62233 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Six3Q62233 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC16.66■□□□□ 0.26
Six3Q62233 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC16.66■□□□□ 0.26
Six3Q62233 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC16.66■□□□□ 0.26
Six3Q62233 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
Six3Q62233 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Six3Q62233 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Six3Q62233 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Six3Q62233 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
Six3Q62233 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Six3Q62233 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC16.66■□□□□ 0.26
Six3Q62233 Gm24841-201ENSMUST00000158676 357 ntBASIC16.66■□□□□ 0.26
Six3Q62233 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC16.66■□□□□ 0.26
Six3Q62233 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Six3Q62233 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Six3Q62233 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Six3Q62233 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
Six3Q62233 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Six3Q62233 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Six3Q62233 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Six3Q62233 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Six3Q62233 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Six3Q62233 Gm15743-202ENSMUST00000182690 1901 ntBASIC16.65■□□□□ 0.26
Six3Q62233 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Six3Q62233 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
Six3Q62233 Gm10698-201ENSMUST00000182663 604 ntBASIC16.65■□□□□ 0.26
Six3Q62233 Gm9694-201ENSMUST00000193347 1189 ntBASIC16.65■□□□□ 0.26
Six3Q62233 CT025689.6-201ENSMUST00000224991 1104 ntBASIC16.65■□□□□ 0.26
Six3Q62233 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC16.65■□□□□ 0.26
Six3Q62233 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Six3Q62233 CT010444.2-201ENSMUST00000217877 1629 ntBASIC16.65■□□□□ 0.26
Six3Q62233 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Six3Q62233 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Six3Q62233 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC16.65■□□□□ 0.26
Six3Q62233 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Six3Q62233 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Six3Q62233 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Six3Q62233 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Six3Q62233 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC16.65■□□□□ 0.26
Six3Q62233 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Six3Q62233 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
Six3Q62233 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Six3Q62233 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Six3Q62233 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Six3Q62233 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Six3Q62233 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Six3Q62233 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Six3Q62233 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Six3Q62233 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC16.64■□□□□ 0.25
Six3Q62233 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Six3Q62233 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Six3Q62233 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
Six3Q62233 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC16.64■□□□□ 0.25
Six3Q62233 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Six3Q62233 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Six3Q62233 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC16.64■□□□□ 0.25
Six3Q62233 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Six3Q62233 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
Six3Q62233 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Six3Q62233 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Six3Q62233 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Six3Q62233 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Six3Q62233 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Six3Q62233 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Six3Q62233 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Six3Q62233 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Six3Q62233 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Six3Q62233 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Six3Q62233 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Six3Q62233 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC16.63■□□□□ 0.25
Six3Q62233 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Six3Q62233 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Six3Q62233 Hivep3-201ENSMUST00000084306 2973 ntBASIC16.63■□□□□ 0.25
Six3Q62233 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Six3Q62233 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
Six3Q62233 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC16.63■□□□□ 0.25
Six3Q62233 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Six3Q62233 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC16.63■□□□□ 0.25
Six3Q62233 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC16.63■□□□□ 0.25
Six3Q62233 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
Six3Q62233 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Six3Q62233 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Six3Q62233 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Six3Q62233 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Six3Q62233 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Six3Q62233 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
Six3Q62233 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Six3Q62233 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
Six3Q62233 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Six3Q62233 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Six3Q62233 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Six3Q62233 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Six3Q62233 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Six3Q62233 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 23.2 ms