Protein–RNA interactions for Protein: Q62231

Six1, Homeobox protein SIX1, mousemouse

Predictions only

Length 284 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six1Q62231 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Six1Q62231 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Six1Q62231 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Six1Q62231 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Six1Q62231 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Six1Q62231 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Six1Q62231 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Six1Q62231 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Six1Q62231 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Six1Q62231 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Six1Q62231 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Six1Q62231 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Six1Q62231 Gm10698-201ENSMUST00000182663 604 ntBASIC17.5■□□□□ 0.39
Six1Q62231 Trmt13-210ENSMUST00000198454 880 ntBASIC17.5■□□□□ 0.39
Six1Q62231 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC17.5■□□□□ 0.39
Six1Q62231 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Six1Q62231 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Six1Q62231 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Six1Q62231 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
Six1Q62231 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Six1Q62231 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Six1Q62231 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC17.49■□□□□ 0.39
Six1Q62231 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
Six1Q62231 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC17.49■□□□□ 0.39
Six1Q62231 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Six1Q62231 Gm5643-201ENSMUST00000117081 966 ntBASIC17.49■□□□□ 0.39
Six1Q62231 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Six1Q62231 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC17.49■□□□□ 0.39
Six1Q62231 AC107711.5-202ENSMUST00000226429 702 ntBASIC17.49■□□□□ 0.39
Six1Q62231 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC17.49■□□□□ 0.39
Six1Q62231 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Six1Q62231 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Six1Q62231 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Six1Q62231 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Six1Q62231 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
Six1Q62231 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC17.49■□□□□ 0.39
Six1Q62231 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Six1Q62231 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Six1Q62231 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
Six1Q62231 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Six1Q62231 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC17.48■□□□□ 0.39
Six1Q62231 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Six1Q62231 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Six1Q62231 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Six1Q62231 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Six1Q62231 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Six1Q62231 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Six1Q62231 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Six1Q62231 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC17.48■□□□□ 0.39
Six1Q62231 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Six1Q62231 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Six1Q62231 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC17.48■□□□□ 0.39
Six1Q62231 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Six1Q62231 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Six1Q62231 Dancr-204ENSMUST00000132389 2347 ntBASIC17.48■□□□□ 0.39
Six1Q62231 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
Six1Q62231 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Six1Q62231 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
Six1Q62231 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Six1Q62231 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
Six1Q62231 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Six1Q62231 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Six1Q62231 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Six1Q62231 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Six1Q62231 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Six1Q62231 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC17.47■□□□□ 0.39
Six1Q62231 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Six1Q62231 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Six1Q62231 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Six1Q62231 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
Six1Q62231 Gm27000-201ENSMUST00000182943 842 ntBASIC17.47■□□□□ 0.39
Six1Q62231 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC17.47■□□□□ 0.39
Six1Q62231 Gm37025-201ENSMUST00000195159 829 ntBASIC17.47■□□□□ 0.39
Six1Q62231 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Six1Q62231 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC17.47■□□□□ 0.39
Six1Q62231 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Six1Q62231 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Six1Q62231 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Six1Q62231 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC17.47■□□□□ 0.39
Six1Q62231 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC17.47■□□□□ 0.39
Six1Q62231 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Six1Q62231 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Six1Q62231 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Six1Q62231 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Six1Q62231 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
Six1Q62231 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Six1Q62231 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Six1Q62231 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC17.46■□□□□ 0.39
Six1Q62231 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
Six1Q62231 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC17.46■□□□□ 0.39
Six1Q62231 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Six1Q62231 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Six1Q62231 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Six1Q62231 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Six1Q62231 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Six1Q62231 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Six1Q62231 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Six1Q62231 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
Six1Q62231 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
Six1Q62231 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 27.1 ms