Protein–RNA interactions for Protein: Q62205

Scn9a, Sodium channel protein type 9 subunit alpha, mousemouse

Predictions only

Length 1,984 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn9aQ62205 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Scn9aQ62205 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Scn9aQ62205 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Scn9aQ62205 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Scn9aQ62205 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Scn9aQ62205 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Scn9aQ62205 Wnt10b-204ENSMUST00000226655 1807 ntBASIC20.09■□□□□ 0.81
Scn9aQ62205 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC20.09■□□□□ 0.81
Scn9aQ62205 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Scn9aQ62205 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Scn9aQ62205 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Scn9aQ62205 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC20.09■□□□□ 0.81
Scn9aQ62205 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
Scn9aQ62205 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Scn9aQ62205 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Scn9aQ62205 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
Scn9aQ62205 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
Scn9aQ62205 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Scn9aQ62205 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Scn9aQ62205 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC20.08■□□□□ 0.81
Scn9aQ62205 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC20.08■□□□□ 0.81
Scn9aQ62205 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
Scn9aQ62205 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Scn9aQ62205 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Scn9aQ62205 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Scn9aQ62205 Gm6190-201ENSMUST00000220683 1374 ntBASIC20.08■□□□□ 0.81
Scn9aQ62205 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Scn9aQ62205 Enoph1-201ENSMUST00000031268 1420 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Scn9aQ62205 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC20.08■□□□□ 0.8
Scn9aQ62205 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Scn9aQ62205 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Scn9aQ62205 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
Scn9aQ62205 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Scn9aQ62205 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Scn9aQ62205 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.8
Scn9aQ62205 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Scn9aQ62205 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC20.07■□□□□ 0.8
Scn9aQ62205 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Scn9aQ62205 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC20.07■□□□□ 0.8
Scn9aQ62205 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC20.07■□□□□ 0.8
Scn9aQ62205 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Scn9aQ62205 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Scn9aQ62205 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC20.07■□□□□ 0.8
Scn9aQ62205 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC20.07■□□□□ 0.8
Scn9aQ62205 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Scn9aQ62205 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
Scn9aQ62205 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
Scn9aQ62205 Gm15165-201ENSMUST00000118140 502 ntBASIC20.06■□□□□ 0.8
Scn9aQ62205 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Scn9aQ62205 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Scn9aQ62205 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Scn9aQ62205 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC20.06■□□□□ 0.8
Scn9aQ62205 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Scn9aQ62205 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Scn9aQ62205 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Scn9aQ62205 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC20.06■□□□□ 0.8
Scn9aQ62205 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC20.06■□□□□ 0.8
Scn9aQ62205 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
Scn9aQ62205 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Scn9aQ62205 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Scn9aQ62205 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Scn9aQ62205 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Scn9aQ62205 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC20.05■□□□□ 0.8
Scn9aQ62205 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Scn9aQ62205 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Scn9aQ62205 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Scn9aQ62205 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Scn9aQ62205 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC20.05■□□□□ 0.8
Scn9aQ62205 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC20.05■□□□□ 0.8
Scn9aQ62205 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC20.05■□□□□ 0.8
Scn9aQ62205 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC20.05■□□□□ 0.8
Scn9aQ62205 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Scn9aQ62205 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
Scn9aQ62205 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Scn9aQ62205 Gm2213-201ENSMUST00000197485 688 ntBASIC20.04■□□□□ 0.8
Scn9aQ62205 Psmb5-202ENSMUST00000227257 622 ntBASIC20.04■□□□□ 0.8
Scn9aQ62205 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
Scn9aQ62205 Gm5953-201ENSMUST00000220644 2616 ntBASIC20.04■□□□□ 0.8
Scn9aQ62205 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Scn9aQ62205 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC20.04■□□□□ 0.8
Scn9aQ62205 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC20.04■□□□□ 0.8
Scn9aQ62205 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Scn9aQ62205 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Scn9aQ62205 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Scn9aQ62205 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Scn9aQ62205 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Scn9aQ62205 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Scn9aQ62205 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC20.03■□□□□ 0.8
Scn9aQ62205 Gm42670-201ENSMUST00000201816 1292 ntBASIC20.03■□□□□ 0.8
Scn9aQ62205 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Scn9aQ62205 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
Scn9aQ62205 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
Scn9aQ62205 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
Scn9aQ62205 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Scn9aQ62205 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Scn9aQ62205 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC20.03■□□□□ 0.8
Scn9aQ62205 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Scn9aQ62205 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Scn9aQ62205 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Scn9aQ62205 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Retrieved 100 of 76,532 protein–RNA pairs in 26.4 ms