Protein–RNA interactions for Protein: Q61575

Foxn1, Forkhead box protein N1, mousemouse

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxn1Q61575 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Foxn1Q61575 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
Foxn1Q61575 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Foxn1Q61575 Tmem97-201ENSMUST00000103242 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Foxn1Q61575 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC19.46■□□□□ 0.71
Foxn1Q61575 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC19.46■□□□□ 0.71
Foxn1Q61575 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Foxn1Q61575 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC19.46■□□□□ 0.71
Foxn1Q61575 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Foxn1Q61575 Gm13312-201ENSMUST00000119631 718 ntBASIC19.46■□□□□ 0.71
Foxn1Q61575 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC19.46■□□□□ 0.71
Foxn1Q61575 Med11-202ENSMUST00000151013 445 ntTSL 2 BASIC19.46■□□□□ 0.71
Foxn1Q61575 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Foxn1Q61575 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
Foxn1Q61575 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
Foxn1Q61575 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Foxn1Q61575 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Foxn1Q61575 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
Foxn1Q61575 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
Foxn1Q61575 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
Foxn1Q61575 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC19.46■□□□□ 0.71
Foxn1Q61575 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC19.46■□□□□ 0.71
Foxn1Q61575 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
Foxn1Q61575 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC19.45■□□□□ 0.7
Foxn1Q61575 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Foxn1Q61575 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Foxn1Q61575 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Foxn1Q61575 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC19.45■□□□□ 0.7
Foxn1Q61575 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Foxn1Q61575 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC19.45■□□□□ 0.7
Foxn1Q61575 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC19.45■□□□□ 0.7
Foxn1Q61575 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC19.45■□□□□ 0.7
Foxn1Q61575 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Foxn1Q61575 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Foxn1Q61575 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
Foxn1Q61575 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Foxn1Q61575 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
Foxn1Q61575 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC19.45■□□□□ 0.7
Foxn1Q61575 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Foxn1Q61575 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
Foxn1Q61575 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Foxn1Q61575 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC19.44■□□□□ 0.7
Foxn1Q61575 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Foxn1Q61575 Enoph1-201ENSMUST00000031268 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Foxn1Q61575 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Foxn1Q61575 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC19.44■□□□□ 0.7
Foxn1Q61575 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC19.44■□□□□ 0.7
Foxn1Q61575 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC19.44■□□□□ 0.7
Foxn1Q61575 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC19.44■□□□□ 0.7
Foxn1Q61575 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Foxn1Q61575 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC19.44■□□□□ 0.7
Foxn1Q61575 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC19.44■□□□□ 0.7
Foxn1Q61575 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC19.44■□□□□ 0.7
Foxn1Q61575 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC19.44■□□□□ 0.7
Foxn1Q61575 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Foxn1Q61575 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Foxn1Q61575 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Foxn1Q61575 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Foxn1Q61575 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Foxn1Q61575 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Foxn1Q61575 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC19.44■□□□□ 0.7
Foxn1Q61575 Gm9885-202ENSMUST00000186234 2209 ntBASIC19.44■□□□□ 0.7
Foxn1Q61575 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Foxn1Q61575 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Foxn1Q61575 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Foxn1Q61575 Gm8784-201ENSMUST00000222096 1435 ntBASIC19.43■□□□□ 0.7
Foxn1Q61575 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Foxn1Q61575 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Foxn1Q61575 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC19.43■□□□□ 0.7
Foxn1Q61575 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Foxn1Q61575 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Foxn1Q61575 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Foxn1Q61575 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC19.43■□□□□ 0.7
Foxn1Q61575 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC19.43■□□□□ 0.7
Foxn1Q61575 Tomm20l-201ENSMUST00000021482 578 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Foxn1Q61575 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC19.43■□□□□ 0.7
Foxn1Q61575 Bloc1s5-203ENSMUST00000224902 612 ntBASIC19.43■□□□□ 0.7
Foxn1Q61575 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Foxn1Q61575 Fam26f-201ENSMUST00000062784 1094 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Foxn1Q61575 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
Foxn1Q61575 Gm42922-201ENSMUST00000195887 2078 ntBASIC19.43■□□□□ 0.7
Foxn1Q61575 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Foxn1Q61575 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Foxn1Q61575 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Foxn1Q61575 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
Foxn1Q61575 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Foxn1Q61575 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Foxn1Q61575 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Foxn1Q61575 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Foxn1Q61575 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Foxn1Q61575 Dapk1-207ENSMUST00000226059 5009 ntBASIC19.43■□□□□ 0.7
Foxn1Q61575 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Foxn1Q61575 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Foxn1Q61575 Dpm3-202ENSMUST00000107462 827 ntAPPRIS P1 TSL 3 BASIC19.42■□□□□ 0.7
Foxn1Q61575 Gm15165-201ENSMUST00000118140 502 ntBASIC19.42■□□□□ 0.7
Foxn1Q61575 Bola3-202ENSMUST00000120040 583 ntTSL 3 BASIC19.42■□□□□ 0.7
Foxn1Q61575 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Foxn1Q61575 Arid2-202ENSMUST00000134985 809 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Foxn1Q61575 Gm20481-201ENSMUST00000173680 564 ntAPPRIS P1 TSL 3 BASIC19.42■□□□□ 0.7
Foxn1Q61575 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 35.4 ms