Protein–RNA interactions for Protein: Q61500

Itm2a, Integral membrane protein 2A, mousemouse

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Itm2aQ61500 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Itm2aQ61500 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Itm2aQ61500 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
Itm2aQ61500 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Itm2aQ61500 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Itm2aQ61500 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Itm2aQ61500 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC16.8■□□□□ 0.28
Itm2aQ61500 Gm37812-201ENSMUST00000195216 2475 ntBASIC16.8■□□□□ 0.28
Itm2aQ61500 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
Itm2aQ61500 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Itm2aQ61500 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Itm2aQ61500 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Itm2aQ61500 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
Itm2aQ61500 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Itm2aQ61500 Gm10849-201ENSMUST00000100397 618 ntBASIC16.8■□□□□ 0.28
Itm2aQ61500 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC16.8■□□□□ 0.28
Itm2aQ61500 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC16.8■□□□□ 0.28
Itm2aQ61500 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
Itm2aQ61500 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC16.8■□□□□ 0.28
Itm2aQ61500 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
Itm2aQ61500 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Itm2aQ61500 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Itm2aQ61500 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Itm2aQ61500 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Itm2aQ61500 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Itm2aQ61500 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
Itm2aQ61500 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Itm2aQ61500 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
Itm2aQ61500 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC16.8■□□□□ 0.28
Itm2aQ61500 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Itm2aQ61500 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Itm2aQ61500 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Itm2aQ61500 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
Itm2aQ61500 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Itm2aQ61500 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Itm2aQ61500 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
Itm2aQ61500 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC16.79■□□□□ 0.28
Itm2aQ61500 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Itm2aQ61500 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Itm2aQ61500 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
Itm2aQ61500 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
Itm2aQ61500 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
Itm2aQ61500 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC16.79■□□□□ 0.28
Itm2aQ61500 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Itm2aQ61500 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Itm2aQ61500 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Itm2aQ61500 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Itm2aQ61500 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Itm2aQ61500 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC16.78■□□□□ 0.28
Itm2aQ61500 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Itm2aQ61500 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Itm2aQ61500 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
Itm2aQ61500 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Itm2aQ61500 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
Itm2aQ61500 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Itm2aQ61500 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Itm2aQ61500 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Itm2aQ61500 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Itm2aQ61500 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC16.78■□□□□ 0.28
Itm2aQ61500 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Itm2aQ61500 Gm15847-201ENSMUST00000121417 1065 ntBASIC16.78■□□□□ 0.28
Itm2aQ61500 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Itm2aQ61500 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC16.78■□□□□ 0.28
Itm2aQ61500 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
Itm2aQ61500 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
Itm2aQ61500 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
Itm2aQ61500 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Itm2aQ61500 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Itm2aQ61500 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Itm2aQ61500 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Itm2aQ61500 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC16.78■□□□□ 0.28
Itm2aQ61500 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Itm2aQ61500 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Itm2aQ61500 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
Itm2aQ61500 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Itm2aQ61500 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Itm2aQ61500 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Itm2aQ61500 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Itm2aQ61500 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
Itm2aQ61500 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
Itm2aQ61500 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC16.77■□□□□ 0.28
Itm2aQ61500 Gm11643-201ENSMUST00000119578 864 ntBASIC16.77■□□□□ 0.28
Itm2aQ61500 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Itm2aQ61500 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC16.77■□□□□ 0.28
Itm2aQ61500 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Itm2aQ61500 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Itm2aQ61500 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
Itm2aQ61500 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Itm2aQ61500 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC16.77■□□□□ 0.27
Itm2aQ61500 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC16.77■□□□□ 0.27
Itm2aQ61500 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Itm2aQ61500 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Itm2aQ61500 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Itm2aQ61500 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Itm2aQ61500 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Itm2aQ61500 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Itm2aQ61500 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Itm2aQ61500 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Itm2aQ61500 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Itm2aQ61500 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC16.76■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 25 ms