Protein–RNA interactions for Protein: Q61412

Vsx2, Visual system homeobox 2, mousemouse

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vsx2Q61412 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Vsx2Q61412 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Vsx2Q61412 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Vsx2Q61412 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.26
Vsx2Q61412 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
Vsx2Q61412 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Vsx2Q61412 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Vsx2Q61412 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Vsx2Q61412 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Vsx2Q61412 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Vsx2Q61412 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Vsx2Q61412 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Vsx2Q61412 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC16.64■□□□□ 0.25
Vsx2Q61412 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
Vsx2Q61412 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC16.64■□□□□ 0.25
Vsx2Q61412 Gm9694-201ENSMUST00000193347 1189 ntBASIC16.64■□□□□ 0.25
Vsx2Q61412 Arhgef4-208ENSMUST00000211073 171 ntBASIC16.64■□□□□ 0.25
Vsx2Q61412 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Vsx2Q61412 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Vsx2Q61412 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC16.64■□□□□ 0.25
Vsx2Q61412 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Vsx2Q61412 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Vsx2Q61412 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
Vsx2Q61412 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Vsx2Q61412 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Vsx2Q61412 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Vsx2Q61412 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC16.63■□□□□ 0.25
Vsx2Q61412 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Vsx2Q61412 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Vsx2Q61412 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Vsx2Q61412 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Vsx2Q61412 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC16.63■□□□□ 0.25
Vsx2Q61412 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Vsx2Q61412 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC16.63■□□□□ 0.25
Vsx2Q61412 Gm4974-201ENSMUST00000209974 875 ntBASIC16.63■□□□□ 0.25
Vsx2Q61412 Timm23-208ENSMUST00000226683 750 ntBASIC16.63■□□□□ 0.25
Vsx2Q61412 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Vsx2Q61412 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
Vsx2Q61412 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Vsx2Q61412 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Vsx2Q61412 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC16.63■□□□□ 0.25
Vsx2Q61412 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Vsx2Q61412 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Vsx2Q61412 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Vsx2Q61412 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Vsx2Q61412 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Vsx2Q61412 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC16.62■□□□□ 0.25
Vsx2Q61412 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Vsx2Q61412 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Vsx2Q61412 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Vsx2Q61412 Gm12085-201ENSMUST00000119263 940 ntBASIC16.62■□□□□ 0.25
Vsx2Q61412 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC16.62■□□□□ 0.25
Vsx2Q61412 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC16.62■□□□□ 0.25
Vsx2Q61412 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC16.62■□□□□ 0.25
Vsx2Q61412 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC16.62■□□□□ 0.25
Vsx2Q61412 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC16.62■□□□□ 0.25
Vsx2Q61412 Otx2os1-204ENSMUST00000227221 751 ntBASIC16.62■□□□□ 0.25
Vsx2Q61412 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Vsx2Q61412 Gm37519-201ENSMUST00000191687 2210 ntBASIC16.62■□□□□ 0.25
Vsx2Q61412 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Vsx2Q61412 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Vsx2Q61412 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Vsx2Q61412 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Vsx2Q61412 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Vsx2Q61412 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Vsx2Q61412 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Vsx2Q61412 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Vsx2Q61412 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Vsx2Q61412 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Vsx2Q61412 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Vsx2Q61412 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Vsx2Q61412 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Vsx2Q61412 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Vsx2Q61412 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Vsx2Q61412 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Vsx2Q61412 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC16.61■□□□□ 0.25
Vsx2Q61412 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC16.61■□□□□ 0.25
Vsx2Q61412 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC16.61■□□□□ 0.25
Vsx2Q61412 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
Vsx2Q61412 Gm20472-201ENSMUST00000174403 1240 ntBASIC16.61■□□□□ 0.25
Vsx2Q61412 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
Vsx2Q61412 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC16.61■□□□□ 0.25
Vsx2Q61412 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC16.61■□□□□ 0.25
Vsx2Q61412 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Vsx2Q61412 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Vsx2Q61412 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Vsx2Q61412 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Vsx2Q61412 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Vsx2Q61412 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC16.61■□□□□ 0.25
Vsx2Q61412 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Vsx2Q61412 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Vsx2Q61412 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
Vsx2Q61412 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC16.6■□□□□ 0.25
Vsx2Q61412 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Vsx2Q61412 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Vsx2Q61412 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Vsx2Q61412 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC16.6■□□□□ 0.25
Vsx2Q61412 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Vsx2Q61412 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Vsx2Q61412 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 21.7 ms