Protein–RNA interactions for Protein: Q61321

Six4, Homeobox protein SIX4, mousemouse

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six4Q61321 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Six4Q61321 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Six4Q61321 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Six4Q61321 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Six4Q61321 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Six4Q61321 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC17.21■□□□□ 0.34
Six4Q61321 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC17.2■□□□□ 0.34
Six4Q61321 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Six4Q61321 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
Six4Q61321 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Six4Q61321 AL590614.2-201ENSMUST00000225374 1937 ntBASIC17.2■□□□□ 0.34
Six4Q61321 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
Six4Q61321 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Six4Q61321 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
Six4Q61321 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC17.2■□□□□ 0.34
Six4Q61321 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
Six4Q61321 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC17.2■□□□□ 0.34
Six4Q61321 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
Six4Q61321 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC17.2■□□□□ 0.34
Six4Q61321 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC17.2■□□□□ 0.34
Six4Q61321 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
Six4Q61321 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
Six4Q61321 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Six4Q61321 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Six4Q61321 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Six4Q61321 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Six4Q61321 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Six4Q61321 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Six4Q61321 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Six4Q61321 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Six4Q61321 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Six4Q61321 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Six4Q61321 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Six4Q61321 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Six4Q61321 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC17.19■□□□□ 0.34
Six4Q61321 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
Six4Q61321 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Six4Q61321 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Six4Q61321 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Six4Q61321 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
Six4Q61321 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Six4Q61321 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Six4Q61321 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
Six4Q61321 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC17.18■□□□□ 0.34
Six4Q61321 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Six4Q61321 AC154855.1-201ENSMUST00000227353 1458 ntBASIC17.18■□□□□ 0.34
Six4Q61321 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC17.18■□□□□ 0.34
Six4Q61321 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Six4Q61321 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC17.18■□□□□ 0.34
Six4Q61321 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
Six4Q61321 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Six4Q61321 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Six4Q61321 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
Six4Q61321 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC17.18■□□□□ 0.34
Six4Q61321 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC17.18■□□□□ 0.34
Six4Q61321 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
Six4Q61321 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC17.18■□□□□ 0.34
Six4Q61321 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC17.18■□□□□ 0.34
Six4Q61321 Gm9987-201ENSMUST00000069768 567 ntBASIC17.18■□□□□ 0.34
Six4Q61321 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
Six4Q61321 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Six4Q61321 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
Six4Q61321 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
Six4Q61321 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Six4Q61321 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Six4Q61321 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
Six4Q61321 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC17.17■□□□□ 0.34
Six4Q61321 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
Six4Q61321 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC17.17■□□□□ 0.34
Six4Q61321 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Six4Q61321 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
Six4Q61321 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Six4Q61321 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
Six4Q61321 Mir7071-201ENSMUST00000184847 69 ntBASIC17.17■□□□□ 0.34
Six4Q61321 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC17.17■□□□□ 0.34
Six4Q61321 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
Six4Q61321 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC17.17■□□□□ 0.34
Six4Q61321 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Six4Q61321 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
Six4Q61321 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC17.17■□□□□ 0.34
Six4Q61321 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Six4Q61321 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC17.17■□□□□ 0.34
Six4Q61321 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Six4Q61321 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Six4Q61321 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Six4Q61321 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Six4Q61321 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Six4Q61321 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
Six4Q61321 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
Six4Q61321 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
Six4Q61321 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC17.16■□□□□ 0.34
Six4Q61321 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
Six4Q61321 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
Six4Q61321 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
Six4Q61321 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Six4Q61321 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Six4Q61321 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
Six4Q61321 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Six4Q61321 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Six4Q61321 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 37 ms