Protein–RNA interactions for Protein: Q61245

Col11a1, Collagen alpha-1(XI) chain, mousemouse

Predictions only

Length 1,804 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col11a1Q61245 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC19.13■□□□□ 0.65
Col11a1Q61245 Gm13312-201ENSMUST00000119631 718 ntBASIC19.13■□□□□ 0.65
Col11a1Q61245 Lgals3-203ENSMUST00000146468 1072 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Col11a1Q61245 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
Col11a1Q61245 Gm25745-201ENSMUST00000174945 133 ntBASIC19.13■□□□□ 0.65
Col11a1Q61245 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Col11a1Q61245 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Col11a1Q61245 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Col11a1Q61245 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Col11a1Q61245 Gm38342-201ENSMUST00000195710 2980 ntBASIC19.12■□□□□ 0.65
Col11a1Q61245 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Col11a1Q61245 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC19.12■□□□□ 0.65
Col11a1Q61245 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Col11a1Q61245 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Col11a1Q61245 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Col11a1Q61245 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Col11a1Q61245 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Col11a1Q61245 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Col11a1Q61245 AC131586.3-201ENSMUST00000228355 1367 ntBASIC19.12■□□□□ 0.65
Col11a1Q61245 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
Col11a1Q61245 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Col11a1Q61245 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Col11a1Q61245 Gm25911-201ENSMUST00000157621 56 ntBASIC19.11■□□□□ 0.65
Col11a1Q61245 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC19.11■□□□□ 0.65
Col11a1Q61245 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC19.11■□□□□ 0.65
Col11a1Q61245 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC19.11■□□□□ 0.65
Col11a1Q61245 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC19.11■□□□□ 0.65
Col11a1Q61245 Ilkap-201ENSMUST00000027534 1368 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Col11a1Q61245 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Col11a1Q61245 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Col11a1Q61245 Gm6627-201ENSMUST00000218299 2386 ntBASIC19.11■□□□□ 0.65
Col11a1Q61245 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
Col11a1Q61245 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Col11a1Q61245 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Col11a1Q61245 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Col11a1Q61245 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Col11a1Q61245 Gm14822-201ENSMUST00000122247 291 ntBASIC19.11■□□□□ 0.65
Col11a1Q61245 Gm6550-201ENSMUST00000187574 993 ntBASIC19.11■□□□□ 0.65
Col11a1Q61245 Gm43935-201ENSMUST00000203569 1050 ntBASIC19.11■□□□□ 0.65
Col11a1Q61245 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC19.11■□□□□ 0.65
Col11a1Q61245 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Col11a1Q61245 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Col11a1Q61245 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Col11a1Q61245 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC19.11■□□□□ 0.65
Col11a1Q61245 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
Col11a1Q61245 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Col11a1Q61245 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
Col11a1Q61245 Gm18856-201ENSMUST00000178096 1374 ntBASIC19.1■□□□□ 0.65
Col11a1Q61245 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Col11a1Q61245 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Col11a1Q61245 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
Col11a1Q61245 Gm2756-201ENSMUST00000195851 400 ntBASIC19.1■□□□□ 0.65
Col11a1Q61245 Rbfox2-207ENSMUST00000227533 1041 ntBASIC19.1■□□□□ 0.65
Col11a1Q61245 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
Col11a1Q61245 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Col11a1Q61245 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Col11a1Q61245 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Col11a1Q61245 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Col11a1Q61245 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Col11a1Q61245 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Col11a1Q61245 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Col11a1Q61245 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC19.09■□□□□ 0.65
Col11a1Q61245 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC19.09■□□□□ 0.65
Col11a1Q61245 Gm44123-201ENSMUST00000204662 577 ntTSL 5 BASIC19.09■□□□□ 0.65
Col11a1Q61245 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC19.09■□□□□ 0.65
Col11a1Q61245 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
Col11a1Q61245 Gm10175-201ENSMUST00000086013 645 ntBASIC19.09■□□□□ 0.65
Col11a1Q61245 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Col11a1Q61245 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Col11a1Q61245 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Col11a1Q61245 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Col11a1Q61245 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Col11a1Q61245 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Col11a1Q61245 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Col11a1Q61245 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
Col11a1Q61245 Qdpr-204ENSMUST00000120867 1234 ntTSL 5 BASIC19.09■□□□□ 0.65
Col11a1Q61245 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC19.09■□□□□ 0.65
Col11a1Q61245 Gnmt-201ENSMUST00000002846 1035 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Col11a1Q61245 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC19.09■□□□□ 0.65
Col11a1Q61245 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Col11a1Q61245 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Col11a1Q61245 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Col11a1Q61245 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
Col11a1Q61245 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Col11a1Q61245 AC125311.2-201ENSMUST00000227477 1940 ntBASIC19.08■□□□□ 0.65
Col11a1Q61245 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC19.08■□□□□ 0.65
Col11a1Q61245 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
Col11a1Q61245 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Col11a1Q61245 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
Col11a1Q61245 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
Col11a1Q61245 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC19.08■□□□□ 0.64
Col11a1Q61245 Gm4535-201ENSMUST00000182274 558 ntBASIC19.08■□□□□ 0.64
Col11a1Q61245 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Col11a1Q61245 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Col11a1Q61245 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Col11a1Q61245 Gm10355-201ENSMUST00000097146 517 ntBASIC19.08■□□□□ 0.64
Col11a1Q61245 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Col11a1Q61245 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
Col11a1Q61245 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Col11a1Q61245 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Retrieved 100 of 76,532 protein–RNA pairs in 25.3 ms