Protein–RNA interactions for Protein: Q5U430

Ubr3, E3 ubiquitin-protein ligase UBR3, mousemouse

Predictions only

Length 1,889 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr3Q5U430 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC20.72■□□□□ 0.91
Ubr3Q5U430 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC20.72■□□□□ 0.91
Ubr3Q5U430 Anapc15-202ENSMUST00000035395 836 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Ubr3Q5U430 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Ubr3Q5U430 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Ubr3Q5U430 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
Ubr3Q5U430 Gm10175-201ENSMUST00000086013 645 ntBASIC20.72■□□□□ 0.91
Ubr3Q5U430 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Ubr3Q5U430 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Ubr3Q5U430 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Ubr3Q5U430 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
Ubr3Q5U430 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
Ubr3Q5U430 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Ubr3Q5U430 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Ubr3Q5U430 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Ubr3Q5U430 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Ubr3Q5U430 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Ubr3Q5U430 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Ubr3Q5U430 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
Ubr3Q5U430 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Ubr3Q5U430 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Ubr3Q5U430 Gm18856-201ENSMUST00000178096 1374 ntBASIC20.71■□□□□ 0.91
Ubr3Q5U430 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Ubr3Q5U430 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC20.71■□□□□ 0.91
Ubr3Q5U430 Rbfox2-207ENSMUST00000227533 1041 ntBASIC20.71■□□□□ 0.91
Ubr3Q5U430 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Ubr3Q5U430 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Ubr3Q5U430 AC131586.3-201ENSMUST00000228355 1367 ntBASIC20.7■□□□□ 0.9
Ubr3Q5U430 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Ubr3Q5U430 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Ubr3Q5U430 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
Ubr3Q5U430 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Ubr3Q5U430 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
Ubr3Q5U430 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC20.7■□□□□ 0.9
Ubr3Q5U430 Gm4535-201ENSMUST00000182274 558 ntBASIC20.7■□□□□ 0.9
Ubr3Q5U430 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Ubr3Q5U430 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Ubr3Q5U430 Gm10355-201ENSMUST00000097146 517 ntBASIC20.7■□□□□ 0.9
Ubr3Q5U430 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Ubr3Q5U430 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Ubr3Q5U430 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Ubr3Q5U430 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC20.69■□□□□ 0.9
Ubr3Q5U430 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Ubr3Q5U430 Gm6736-201ENSMUST00000166583 948 ntBASIC20.69■□□□□ 0.9
Ubr3Q5U430 Gm6550-201ENSMUST00000187574 993 ntBASIC20.69■□□□□ 0.9
Ubr3Q5U430 Gm43935-201ENSMUST00000203569 1050 ntBASIC20.69■□□□□ 0.9
Ubr3Q5U430 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Ubr3Q5U430 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Ubr3Q5U430 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC20.69■□□□□ 0.9
Ubr3Q5U430 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Ubr3Q5U430 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
Ubr3Q5U430 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC20.69■□□□□ 0.9
Ubr3Q5U430 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC20.69■□□□□ 0.9
Ubr3Q5U430 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC20.69■□□□□ 0.9
Ubr3Q5U430 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC20.69■□□□□ 0.9
Ubr3Q5U430 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC20.69■□□□□ 0.9
Ubr3Q5U430 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Ubr3Q5U430 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Ubr3Q5U430 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Ubr3Q5U430 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Ubr3Q5U430 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
Ubr3Q5U430 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
Ubr3Q5U430 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
Ubr3Q5U430 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC20.68■□□□□ 0.9
Ubr3Q5U430 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC20.68■□□□□ 0.9
Ubr3Q5U430 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Ubr3Q5U430 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
Ubr3Q5U430 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Ubr3Q5U430 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Ubr3Q5U430 AC123834.2-201ENSMUST00000224038 2340 ntBASIC20.67■□□□□ 0.9
Ubr3Q5U430 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Ubr3Q5U430 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC20.67■□□□□ 0.9
Ubr3Q5U430 Gm44123-201ENSMUST00000204662 577 ntTSL 5 BASIC20.67■□□□□ 0.9
Ubr3Q5U430 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC20.67■□□□□ 0.9
Ubr3Q5U430 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC20.67■□□□□ 0.9
Ubr3Q5U430 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Ubr3Q5U430 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC20.67■□□□□ 0.9
Ubr3Q5U430 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
Ubr3Q5U430 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Ubr3Q5U430 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Ubr3Q5U430 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Ubr3Q5U430 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Ubr3Q5U430 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Ubr3Q5U430 Ilkap-201ENSMUST00000027534 1368 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Ubr3Q5U430 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
Ubr3Q5U430 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Ubr3Q5U430 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Ubr3Q5U430 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
Ubr3Q5U430 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC20.67■□□□□ 0.9
Ubr3Q5U430 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Ubr3Q5U430 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC20.67■□□□□ 0.9
Ubr3Q5U430 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC20.67■□□□□ 0.9
Ubr3Q5U430 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC20.67■□□□□ 0.9
Ubr3Q5U430 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
Ubr3Q5U430 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Ubr3Q5U430 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Ubr3Q5U430 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
Ubr3Q5U430 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Ubr3Q5U430 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Ubr3Q5U430 Gm13418-201ENSMUST00000119097 944 ntBASIC20.66■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 21.1 ms