Protein–RNA interactions for Protein: Q5R1I0

Trav6d-4, T cell receptor alpha variable 6D-4 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6d-4Q5R1I0 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav6d-4Q5R1I0 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Trav6d-4Q5R1I0 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav6d-4Q5R1I0 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Trav6d-4Q5R1I0 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Trav6d-4Q5R1I0 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Trav6d-4Q5R1I0 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Trav6d-4Q5R1I0 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.11
Trav6d-4Q5R1I0 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Trav6d-4Q5R1I0 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.11
Trav6d-4Q5R1I0 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
Trav6d-4Q5R1I0 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Trav6d-4Q5R1I0 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Trav6d-4Q5R1I0 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC14.33□□□□□ -0.11
Trav6d-4Q5R1I0 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trav6d-4Q5R1I0 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Trav6d-4Q5R1I0 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Trav6d-4Q5R1I0 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trav6d-4Q5R1I0 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC14.33□□□□□ -0.12
Trav6d-4Q5R1I0 Mir1668-201ENSMUST00000184114 107 ntBASIC14.33□□□□□ -0.12
Trav6d-4Q5R1I0 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC14.33□□□□□ -0.12
Trav6d-4Q5R1I0 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Trav6d-4Q5R1I0 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trav6d-4Q5R1I0 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trav6d-4Q5R1I0 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Trav6d-4Q5R1I0 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Trav6d-4Q5R1I0 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trav6d-4Q5R1I0 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trav6d-4Q5R1I0 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trav6d-4Q5R1I0 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC14.33□□□□□ -0.12
Trav6d-4Q5R1I0 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Trav6d-4Q5R1I0 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav6d-4Q5R1I0 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Trav6d-4Q5R1I0 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav6d-4Q5R1I0 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav6d-4Q5R1I0 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC14.32□□□□□ -0.12
Trav6d-4Q5R1I0 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav6d-4Q5R1I0 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav6d-4Q5R1I0 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC14.32□□□□□ -0.12
Trav6d-4Q5R1I0 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC14.32□□□□□ -0.12
Trav6d-4Q5R1I0 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav6d-4Q5R1I0 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav6d-4Q5R1I0 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Trav6d-4Q5R1I0 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav6d-4Q5R1I0 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Trav6d-4Q5R1I0 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC14.32□□□□□ -0.12
Trav6d-4Q5R1I0 Gm27389-201ENSMUST00000183622 195 ntBASIC14.32□□□□□ -0.12
Trav6d-4Q5R1I0 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav6d-4Q5R1I0 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC14.32□□□□□ -0.12
Trav6d-4Q5R1I0 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav6d-4Q5R1I0 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Trav6d-4Q5R1I0 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav6d-4Q5R1I0 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Trav6d-4Q5R1I0 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav6d-4Q5R1I0 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav6d-4Q5R1I0 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Trav6d-4Q5R1I0 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav6d-4Q5R1I0 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav6d-4Q5R1I0 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav6d-4Q5R1I0 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Trav6d-4Q5R1I0 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav6d-4Q5R1I0 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav6d-4Q5R1I0 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Trav6d-4Q5R1I0 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Trav6d-4Q5R1I0 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
Trav6d-4Q5R1I0 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC14.31□□□□□ -0.12
Trav6d-4Q5R1I0 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Trav6d-4Q5R1I0 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav6d-4Q5R1I0 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav6d-4Q5R1I0 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Trav6d-4Q5R1I0 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Trav6d-4Q5R1I0 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC14.31□□□□□ -0.12
Trav6d-4Q5R1I0 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Trav6d-4Q5R1I0 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Trav6d-4Q5R1I0 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav6d-4Q5R1I0 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav6d-4Q5R1I0 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav6d-4Q5R1I0 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
Trav6d-4Q5R1I0 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav6d-4Q5R1I0 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC14.3□□□□□ -0.12
Trav6d-4Q5R1I0 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav6d-4Q5R1I0 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav6d-4Q5R1I0 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Trav6d-4Q5R1I0 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Trav6d-4Q5R1I0 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav6d-4Q5R1I0 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav6d-4Q5R1I0 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav6d-4Q5R1I0 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav6d-4Q5R1I0 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav6d-4Q5R1I0 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
Trav6d-4Q5R1I0 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav6d-4Q5R1I0 Gm23634-201ENSMUST00000175071 91 ntBASIC14.3□□□□□ -0.12
Trav6d-4Q5R1I0 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
Trav6d-4Q5R1I0 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC14.3□□□□□ -0.12
Trav6d-4Q5R1I0 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav6d-4Q5R1I0 Gm21559-201ENSMUST00000220638 855 ntBASIC14.3□□□□□ -0.12
Trav6d-4Q5R1I0 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav6d-4Q5R1I0 Gm8587-201ENSMUST00000076538 843 ntBASIC14.3□□□□□ -0.12
Trav6d-4Q5R1I0 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
Trav6d-4Q5R1I0 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 19.6 ms