Protein–RNA interactions for Protein: Q5R1D2

Trav15-1-dv6-1, T cell receptor alpha variable 15-1-DV6-1 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15-1-dv6-1Q5R1D2 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav15-1-dv6-1Q5R1D2 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Trav15-1-dv6-1Q5R1D2 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC13.3□□□□□ -0.28
Trav15-1-dv6-1Q5R1D2 Ap3s1-204ENSMUST00000225520 957 ntBASIC13.3□□□□□ -0.28
Trav15-1-dv6-1Q5R1D2 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav15-1-dv6-1Q5R1D2 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav15-1-dv6-1Q5R1D2 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Trav15-1-dv6-1Q5R1D2 Gm13509-201ENSMUST00000119733 1308 ntBASIC13.3□□□□□ -0.28
Trav15-1-dv6-1Q5R1D2 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav15-1-dv6-1Q5R1D2 Gm26596-201ENSMUST00000180464 2655 ntBASIC13.3□□□□□ -0.28
Trav15-1-dv6-1Q5R1D2 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav15-1-dv6-1Q5R1D2 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav15-1-dv6-1Q5R1D2 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav15-1-dv6-1Q5R1D2 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
Trav15-1-dv6-1Q5R1D2 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Trav15-1-dv6-1Q5R1D2 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav15-1-dv6-1Q5R1D2 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC13.3□□□□□ -0.28
Trav15-1-dv6-1Q5R1D2 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Trav15-1-dv6-1Q5R1D2 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav15-1-dv6-1Q5R1D2 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC13.29□□□□□ -0.28
Trav15-1-dv6-1Q5R1D2 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Trav15-1-dv6-1Q5R1D2 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav15-1-dv6-1Q5R1D2 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav15-1-dv6-1Q5R1D2 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav15-1-dv6-1Q5R1D2 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC13.29□□□□□ -0.28
Trav15-1-dv6-1Q5R1D2 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Trav15-1-dv6-1Q5R1D2 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav15-1-dv6-1Q5R1D2 Gm37820-201ENSMUST00000194021 2147 ntBASIC13.29□□□□□ -0.28
Trav15-1-dv6-1Q5R1D2 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC13.29□□□□□ -0.28
Trav15-1-dv6-1Q5R1D2 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav15-1-dv6-1Q5R1D2 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC13.29□□□□□ -0.28
Trav15-1-dv6-1Q5R1D2 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Trav15-1-dv6-1Q5R1D2 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
Trav15-1-dv6-1Q5R1D2 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav15-1-dv6-1Q5R1D2 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav15-1-dv6-1Q5R1D2 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav15-1-dv6-1Q5R1D2 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Trav15-1-dv6-1Q5R1D2 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
Trav15-1-dv6-1Q5R1D2 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav15-1-dv6-1Q5R1D2 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Trav15-1-dv6-1Q5R1D2 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC13.29□□□□□ -0.28
Trav15-1-dv6-1Q5R1D2 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav15-1-dv6-1Q5R1D2 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav15-1-dv6-1Q5R1D2 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav15-1-dv6-1Q5R1D2 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
Trav15-1-dv6-1Q5R1D2 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav15-1-dv6-1Q5R1D2 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Trav15-1-dv6-1Q5R1D2 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav15-1-dv6-1Q5R1D2 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav15-1-dv6-1Q5R1D2 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav15-1-dv6-1Q5R1D2 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Trav15-1-dv6-1Q5R1D2 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav15-1-dv6-1Q5R1D2 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav15-1-dv6-1Q5R1D2 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav15-1-dv6-1Q5R1D2 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav15-1-dv6-1Q5R1D2 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC13.28□□□□□ -0.28
Trav15-1-dv6-1Q5R1D2 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav15-1-dv6-1Q5R1D2 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC13.28□□□□□ -0.28
Trav15-1-dv6-1Q5R1D2 Gm2399-201ENSMUST00000104944 225 ntBASIC13.28□□□□□ -0.28
Trav15-1-dv6-1Q5R1D2 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Trav15-1-dv6-1Q5R1D2 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC13.28□□□□□ -0.28
Trav15-1-dv6-1Q5R1D2 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC13.28□□□□□ -0.28
Trav15-1-dv6-1Q5R1D2 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC13.28□□□□□ -0.28
Trav15-1-dv6-1Q5R1D2 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav15-1-dv6-1Q5R1D2 Zfp783-201ENSMUST00000095946 670 ntBASIC13.28□□□□□ -0.28
Trav15-1-dv6-1Q5R1D2 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav15-1-dv6-1Q5R1D2 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav15-1-dv6-1Q5R1D2 Ipo8-201ENSMUST00000048418 5360 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav15-1-dv6-1Q5R1D2 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
Trav15-1-dv6-1Q5R1D2 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav15-1-dv6-1Q5R1D2 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav15-1-dv6-1Q5R1D2 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Trav15-1-dv6-1Q5R1D2 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav15-1-dv6-1Q5R1D2 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Trav15-1-dv6-1Q5R1D2 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav15-1-dv6-1Q5R1D2 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav15-1-dv6-1Q5R1D2 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav15-1-dv6-1Q5R1D2 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC13.27□□□□□ -0.28
Trav15-1-dv6-1Q5R1D2 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.28
Trav15-1-dv6-1Q5R1D2 Magi1-202ENSMUST00000089317 7209 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.28
Trav15-1-dv6-1Q5R1D2 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Trav15-1-dv6-1Q5R1D2 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Trav15-1-dv6-1Q5R1D2 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Trav15-1-dv6-1Q5R1D2 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Trav15-1-dv6-1Q5R1D2 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Trav15-1-dv6-1Q5R1D2 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Trav15-1-dv6-1Q5R1D2 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Trav15-1-dv6-1Q5R1D2 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Trav15-1-dv6-1Q5R1D2 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Trav15-1-dv6-1Q5R1D2 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Trav15-1-dv6-1Q5R1D2 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trav15-1-dv6-1Q5R1D2 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC13.27□□□□□ -0.29
Trav15-1-dv6-1Q5R1D2 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trav15-1-dv6-1Q5R1D2 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC13.27□□□□□ -0.29
Trav15-1-dv6-1Q5R1D2 Gm2011-201ENSMUST00000203124 1263 ntBASIC13.27□□□□□ -0.29
Trav15-1-dv6-1Q5R1D2 Gm7514-201ENSMUST00000209475 934 ntBASIC13.27□□□□□ -0.29
Trav15-1-dv6-1Q5R1D2 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
Trav15-1-dv6-1Q5R1D2 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trav15-1-dv6-1Q5R1D2 CT010478.1-201ENSMUST00000220747 2787 ntBASIC13.27□□□□□ -0.29
Trav15-1-dv6-1Q5R1D2 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 31.1 ms