Protein–RNA interactions for Protein: Q5H8C4

Vps13a, Vacuolar protein sorting-associated protein 13A, mousemouse

Predictions only

Length 3,166 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps13aQ5H8C4 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
Vps13aQ5H8C4 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Vps13aQ5H8C4 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Vps13aQ5H8C4 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Vps13aQ5H8C4 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
Vps13aQ5H8C4 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Vps13aQ5H8C4 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Vps13aQ5H8C4 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Vps13aQ5H8C4 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Vps13aQ5H8C4 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Vps13aQ5H8C4 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC16.91■□□□□ 0.3
Vps13aQ5H8C4 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Vps13aQ5H8C4 Gm11336-201ENSMUST00000118168 334 ntBASIC16.91■□□□□ 0.3
Vps13aQ5H8C4 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Vps13aQ5H8C4 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Vps13aQ5H8C4 Snrnp25-201ENSMUST00000039601 821 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Vps13aQ5H8C4 Msantd3-202ENSMUST00000064807 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Vps13aQ5H8C4 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
Vps13aQ5H8C4 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Vps13aQ5H8C4 Adprm-201ENSMUST00000116363 1283 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Vps13aQ5H8C4 Gm15165-201ENSMUST00000118140 502 ntBASIC16.91■□□□□ 0.3
Vps13aQ5H8C4 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Vps13aQ5H8C4 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Vps13aQ5H8C4 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC16.9■□□□□ 0.3
Vps13aQ5H8C4 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC16.9■□□□□ 0.3
Vps13aQ5H8C4 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC16.9■□□□□ 0.3
Vps13aQ5H8C4 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC16.9■□□□□ 0.3
Vps13aQ5H8C4 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Vps13aQ5H8C4 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
Vps13aQ5H8C4 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Vps13aQ5H8C4 Gm15590-201ENSMUST00000078419 552 ntBASIC16.9■□□□□ 0.3
Vps13aQ5H8C4 Gm37374-201ENSMUST00000194954 1829 ntBASIC16.9■□□□□ 0.3
Vps13aQ5H8C4 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Vps13aQ5H8C4 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.3
Vps13aQ5H8C4 Gdpd3-201ENSMUST00000032944 1148 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Vps13aQ5H8C4 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Vps13aQ5H8C4 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
Vps13aQ5H8C4 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Vps13aQ5H8C4 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
Vps13aQ5H8C4 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Vps13aQ5H8C4 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Vps13aQ5H8C4 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.3
Vps13aQ5H8C4 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.3
Vps13aQ5H8C4 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC16.89■□□□□ 0.3
Vps13aQ5H8C4 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Vps13aQ5H8C4 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
Vps13aQ5H8C4 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Vps13aQ5H8C4 Idnk-204ENSMUST00000226010 1898 ntBASIC16.89■□□□□ 0.29
Vps13aQ5H8C4 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Vps13aQ5H8C4 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Vps13aQ5H8C4 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Vps13aQ5H8C4 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Vps13aQ5H8C4 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Vps13aQ5H8C4 Gm43935-201ENSMUST00000203569 1050 ntBASIC16.89■□□□□ 0.29
Vps13aQ5H8C4 AC122351.1-201ENSMUST00000220467 126 ntBASIC16.89■□□□□ 0.29
Vps13aQ5H8C4 Klk15-201ENSMUST00000068625 845 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Vps13aQ5H8C4 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Vps13aQ5H8C4 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
Vps13aQ5H8C4 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Vps13aQ5H8C4 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Vps13aQ5H8C4 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Vps13aQ5H8C4 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
Vps13aQ5H8C4 AC084391.1-201ENSMUST00000200651 141 ntBASIC16.88■□□□□ 0.29
Vps13aQ5H8C4 Aga-201ENSMUST00000033920 1181 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
Vps13aQ5H8C4 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
Vps13aQ5H8C4 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Vps13aQ5H8C4 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
Vps13aQ5H8C4 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Vps13aQ5H8C4 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Vps13aQ5H8C4 Wnt10b-204ENSMUST00000226655 1807 ntBASIC16.88■□□□□ 0.29
Vps13aQ5H8C4 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Vps13aQ5H8C4 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Vps13aQ5H8C4 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Vps13aQ5H8C4 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC16.87■□□□□ 0.29
Vps13aQ5H8C4 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Vps13aQ5H8C4 Dad1-201ENSMUST00000022781 878 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Vps13aQ5H8C4 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Vps13aQ5H8C4 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Vps13aQ5H8C4 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Vps13aQ5H8C4 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Vps13aQ5H8C4 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Vps13aQ5H8C4 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Vps13aQ5H8C4 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Vps13aQ5H8C4 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Vps13aQ5H8C4 Wdyhv1-206ENSMUST00000227142 786 ntBASIC16.87■□□□□ 0.29
Vps13aQ5H8C4 Rpl28-201ENSMUST00000032597 1106 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Vps13aQ5H8C4 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Vps13aQ5H8C4 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Vps13aQ5H8C4 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
Vps13aQ5H8C4 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC16.86■□□□□ 0.29
Vps13aQ5H8C4 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Vps13aQ5H8C4 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC16.86■□□□□ 0.29
Vps13aQ5H8C4 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC16.86■□□□□ 0.29
Vps13aQ5H8C4 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Vps13aQ5H8C4 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
Vps13aQ5H8C4 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Vps13aQ5H8C4 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
Vps13aQ5H8C4 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Vps13aQ5H8C4 Nup188-205ENSMUST00000138666 534 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Vps13aQ5H8C4 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 24.3 ms