Protein–RNA interactions for Protein: Q5DTM8

Rnf20, E3 ubiquitin-protein ligase BRE1A, mousemouse

Predictions only

Length 973 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf20Q5DTM8 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Rnf20Q5DTM8 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
Rnf20Q5DTM8 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Rnf20Q5DTM8 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC20.3■□□□□ 0.84
Rnf20Q5DTM8 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
Rnf20Q5DTM8 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC20.3■□□□□ 0.84
Rnf20Q5DTM8 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Rnf20Q5DTM8 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Rnf20Q5DTM8 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Rnf20Q5DTM8 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
Rnf20Q5DTM8 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC20.3■□□□□ 0.84
Rnf20Q5DTM8 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Rnf20Q5DTM8 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Rnf20Q5DTM8 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Rnf20Q5DTM8 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
Rnf20Q5DTM8 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
Rnf20Q5DTM8 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Rnf20Q5DTM8 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
Rnf20Q5DTM8 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
Rnf20Q5DTM8 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Rnf20Q5DTM8 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Rnf20Q5DTM8 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Rnf20Q5DTM8 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC20.29■□□□□ 0.84
Rnf20Q5DTM8 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Rnf20Q5DTM8 Gm7638-201ENSMUST00000121348 967 ntBASIC20.29■□□□□ 0.84
Rnf20Q5DTM8 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC20.29■□□□□ 0.84
Rnf20Q5DTM8 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC20.29■□□□□ 0.84
Rnf20Q5DTM8 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Rnf20Q5DTM8 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Rnf20Q5DTM8 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
Rnf20Q5DTM8 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Rnf20Q5DTM8 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Rnf20Q5DTM8 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Rnf20Q5DTM8 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Rnf20Q5DTM8 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC20.29■□□□□ 0.84
Rnf20Q5DTM8 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Rnf20Q5DTM8 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
Rnf20Q5DTM8 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC20.29■□□□□ 0.84
Rnf20Q5DTM8 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
Rnf20Q5DTM8 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC20.28■□□□□ 0.84
Rnf20Q5DTM8 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Rnf20Q5DTM8 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Rnf20Q5DTM8 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Rnf20Q5DTM8 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Rnf20Q5DTM8 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Rnf20Q5DTM8 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Rnf20Q5DTM8 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC20.28■□□□□ 0.84
Rnf20Q5DTM8 Odf3b-204ENSMUST00000227834 930 ntBASIC20.28■□□□□ 0.84
Rnf20Q5DTM8 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Rnf20Q5DTM8 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Rnf20Q5DTM8 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Rnf20Q5DTM8 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Rnf20Q5DTM8 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Rnf20Q5DTM8 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Rnf20Q5DTM8 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Rnf20Q5DTM8 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
Rnf20Q5DTM8 Gm11620-201ENSMUST00000118770 1845 ntBASIC20.27■□□□□ 0.84
Rnf20Q5DTM8 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC20.27■□□□□ 0.84
Rnf20Q5DTM8 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Rnf20Q5DTM8 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Rnf20Q5DTM8 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Rnf20Q5DTM8 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Rnf20Q5DTM8 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Rnf20Q5DTM8 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC20.27■□□□□ 0.84
Rnf20Q5DTM8 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Rnf20Q5DTM8 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Rnf20Q5DTM8 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Rnf20Q5DTM8 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Rnf20Q5DTM8 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC20.27■□□□□ 0.84
Rnf20Q5DTM8 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC20.27■□□□□ 0.84
Rnf20Q5DTM8 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC20.27■□□□□ 0.84
Rnf20Q5DTM8 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Rnf20Q5DTM8 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC20.27■□□□□ 0.84
Rnf20Q5DTM8 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Rnf20Q5DTM8 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC20.27■□□□□ 0.83
Rnf20Q5DTM8 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Rnf20Q5DTM8 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC20.26■□□□□ 0.83
Rnf20Q5DTM8 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Rnf20Q5DTM8 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Rnf20Q5DTM8 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Rnf20Q5DTM8 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Rnf20Q5DTM8 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Rnf20Q5DTM8 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC20.26■□□□□ 0.83
Rnf20Q5DTM8 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Rnf20Q5DTM8 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Rnf20Q5DTM8 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Rnf20Q5DTM8 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
Rnf20Q5DTM8 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Rnf20Q5DTM8 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
Rnf20Q5DTM8 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Rnf20Q5DTM8 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Rnf20Q5DTM8 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Rnf20Q5DTM8 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Rnf20Q5DTM8 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
Rnf20Q5DTM8 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Rnf20Q5DTM8 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Rnf20Q5DTM8 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC20.25■□□□□ 0.83
Rnf20Q5DTM8 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Rnf20Q5DTM8 Gm13181-201ENSMUST00000120117 1069 ntBASIC20.25■□□□□ 0.83
Rnf20Q5DTM8 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC20.25■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 33.8 ms